Protein
View in Explore- Genbank accession
- QPX71646.1 [GenBank]
- Protein name
- cell wall-binding protein
- RBP type
-
TSP
- Protein sequence
-
MTVTRYKPEVVITFYTETGDLVARNVKDPKSNEDNDLVNVTTLRDMNTDSPTFTINLTRKKMWHKWIAPNDLVKIEMHRPPQIKQTVFVGLVDDARKNVVLSDDGVQRVITITGRGIAKAFVENDIGVVPEAEYASTTVGWLQSVGVNLAGSSMSQILKATWDIVAKKMVNYRWSNHKELFDIIGYSFTDRPNMVLLDDSSIINYEGSLYSFLKEIAEPPFYELFFKINANVPMLVARPTPFNPEEWNRLKAHKITDDDVVNEDIGRSDVETYTLYSVGAKTLFSPNDTYKTFGQRPFWYKPYADKYGIKRLHVESAYMSVAEDTDANLVDIMRELMADLYNWNIRNNSFYNGKIVVVGKSEYQLGERLLYHSDEDQSIREFYITSVRHTFNNYGRWVTELGVTRGCHPNERFLPPVGRYTEYSGIGLIEFNPEKAREALMAGSDQSNPLDTSDQVTANDVVAGAYEVMNNGINGHKIRYVFGGNSPKTGALDCSSFTQYIYKTYAGLDIGRTTGQQVQKGTKVSKDKLEPGDLVFFKNTYNSSHIYGVSHVGIYVGDGKFINNTSGGGGVQVDKLSNSYWSSHWLMGRRVLDKKTTSPSKSTGKGTDYTATAYGASKENLGVPDWWVPTYKTATGTTPTEGRTIAVDPKVIPLHSKVYIESDFPGITGEYIAEDTGGAIKGKRIDIYFNDIPPKYSPSAARKRMLKFGKRTVKVTILRRGK
- Physico‐chemical
properties -
protein length: 722 AA molecular weight: 81197,73520 Da isoelectric point: 8,47071 aromaticity: 0,10942 hydropathy: -0,45582
Domains
Domains [InterPro]
DC_0587
STR
1–433
STR
1–433
G3DSA:3.90.1720.10
RBD
431–587
RBD
431–587
G3DSA:3.90.1720.10
RBD
431–590
RBD
431–590
IPR000064
ENZ
462–592
ENZ
462–592
IPR038765
STR
475–593
STR
475–593
IPR000064
ENZ
479–589
ENZ
479–589
1
722
Architecture
STR 1-433 | RBD 434-474 | STR 475-593 | RBD 609-718 |
Legend:
ATT
STR
RBD
CBM
LEC
ENZ
CHP
LNK
TAS
TTP
UNK
Unmapped
Tail Spike Domain Segmentation
Tail Spike Domain Segmentation
This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.
Domain Layout
1
722
| Domain | Start | End | Length (AA) | Confidence |
|---|---|---|---|---|
| N-terminal | 1 | 154 | 154 | 0,7480 |
| Central domain | 155 | 360 | 207 | 0,3360 |
| C-terminal | 361 | 722 | 361 | 0,2903 |
Note: Constraints were applied during segmentation.
Fixed 5 C-terminal predictions appearing before Central domain
Fixed 5 C-terminal predictions appearing before Central domain
Legend:
N-terminal
Central domain
C-terminal
3D Structure with Domain Coloring
The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).
Domain Coloring
N-terminal
1-154
1-154
Central
155-360
155-360
C-terminal
361-722
361-722
Taxonomy
| Name | Taxonomy ID | Lineage | |
|---|---|---|---|
| Phage |
Bacillus phage SP8 [NCBI] |
2770327 | Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes |
| Host |
Bacillus subtilis [NCBI] |
1423 | cellular organisms > Bacteria > Bacillati > Bacillota > Bacilli > Bacillales |
Coding sequence (CDS)
Coding sequence (CDS)
Genbank protein accession
QPX71646.1
[NCBI]
Genbank nucleotide accession
MW001214
[NCBI]
CDS location
range 59078 -> 61246
strand +
strand +
CDS
ATGACTGTTACTAGATACAAACCAGAAGTTGTTATAACTTTTTATACTGAAACGGGCGACCTAGTCGCCCGTAATGTTAAAGATCCAAAGTCCAATGAGGATAATGATTTAGTAAACGTAACGACTCTCAGGGACATGAATACAGATTCACCCACCTTTACCATAAATCTGACTAGGAAAAAGATGTGGCACAAGTGGATAGCACCTAATGACTTAGTGAAGATAGAAATGCATAGACCTCCTCAGATTAAGCAAACGGTATTTGTGGGTCTTGTAGATGATGCTAGGAAAAACGTTGTTTTAAGTGATGACGGTGTCCAAAGGGTTATTACAATCACAGGAAGAGGAATAGCTAAGGCTTTTGTAGAAAATGATATAGGGGTGGTCCCTGAAGCGGAGTACGCATCTACAACAGTTGGTTGGCTACAGTCAGTTGGGGTGAACTTAGCAGGGTCCTCTATGTCCCAGATACTAAAAGCCACTTGGGACATAGTAGCTAAAAAAATGGTCAACTATAGGTGGTCAAACCACAAAGAGCTATTTGACATCATTGGGTACAGTTTTACTGATAGACCAAACATGGTTCTATTGGATGACTCCTCCATAATAAACTACGAGGGAAGCCTATACTCATTTTTAAAAGAGATAGCGGAACCTCCATTTTATGAGCTGTTTTTTAAGATAAATGCTAATGTTCCTATGTTGGTTGCTAGACCAACTCCTTTTAACCCGGAGGAGTGGAATAGGCTAAAGGCTCATAAAATAACGGACGATGATGTTGTTAACGAAGACATAGGAAGGTCTGATGTAGAGACGTACACTCTATATTCAGTTGGTGCCAAGACACTGTTTAGTCCCAATGATACCTACAAAACTTTTGGACAAAGACCATTCTGGTATAAGCCCTATGCTGACAAGTACGGCATAAAGAGATTGCATGTAGAGAGCGCCTACATGTCTGTAGCAGAGGACACAGACGCTAACTTGGTAGATATCATGAGGGAATTAATGGCAGATTTATATAACTGGAATATAAGAAACAACTCTTTCTATAATGGAAAGATAGTTGTGGTTGGTAAATCTGAATACCAGCTAGGAGAGAGGCTACTATATCATTCTGACGAGGACCAAAGCATAAGAGAGTTTTATATAACTTCTGTAAGACACACCTTTAATAACTATGGTAGATGGGTAACTGAACTTGGTGTCACAAGAGGATGTCACCCTAATGAGAGATTCTTGCCCCCTGTAGGCAGGTACACTGAGTACAGTGGGATAGGACTTATTGAGTTCAACCCAGAAAAAGCTAGGGAAGCACTGATGGCTGGGTCTGATCAGTCAAACCCTTTAGATACAAGTGACCAAGTCACAGCAAATGATGTTGTTGCAGGTGCTTACGAGGTTATGAACAATGGTATTAATGGACACAAAATAAGGTACGTCTTTGGAGGTAACTCCCCTAAGACAGGTGCTCTAGATTGCTCCTCCTTTACCCAATATATCTACAAGACCTATGCAGGATTGGATATTGGTCGTACAACAGGACAGCAGGTACAAAAAGGGACTAAGGTATCTAAAGACAAATTGGAACCGGGTGACTTGGTCTTCTTTAAGAACACCTATAACAGTTCTCACATCTATGGAGTATCTCATGTAGGTATATATGTTGGAGATGGTAAGTTTATCAACAACACCAGTGGTGGTGGGGGAGTACAAGTAGATAAACTTTCTAATAGCTATTGGTCCTCACATTGGCTGATGGGGAGAAGGGTATTAGATAAGAAAACCACAAGCCCTAGTAAATCTACGGGTAAAGGGACAGACTACACTGCAACTGCTTATGGAGCATCTAAGGAAAACCTTGGTGTACCTGACTGGTGGGTACCAACTTATAAGACCGCAACAGGTACGACACCAACAGAAGGCAGAACTATCGCTGTGGACCCTAAGGTCATCCCGCTACACAGTAAAGTATATATAGAATCTGATTTTCCGGGCATCACAGGAGAGTATATAGCAGAAGACACAGGGGGAGCCATAAAAGGTAAACGAATAGATATATACTTTAATGATATACCTCCTAAGTACAGCCCTTCAGCGGCAAGAAAGAGGATGCTCAAGTTTGGTAAACGTACAGTAAAGGTAACAATTCTAAGGAGGGGTAAGTAG
Genome Context
Genome Context
Tertiary structure
PDB ID
376be453321cd307d92d0ffb7d6831150ff6dc369732c4163f80e81b40cef729
Model Confidence
Very high
pLDDT > 90
pLDDT > 90
High
90 > pLDDT > 70
90 > pLDDT > 70
Low
70 > pLDDT > 50
70 > pLDDT > 50
Very low
pLDDT < 50
pLDDT < 50