Protein

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Genbank accession
YP_009889341.1 [GenBank]
Protein name
tail spike protein
RBP type
TSP
Evidence UniProt/TrEMBL
Probability 1,00
TF
Evidence GenBank
Probability 1,00
Protein sequence
MNPQFNQPKGSTAKEINKNPRELWRRALSDLGLNLVEGSFEDGATVTTATDAVWHINGAQCYTWGGSLPKTVNKNSTPGTEGGIGAGQWSDVKDISLRNHLEGRLVLVVDSFSDAVLSDPDNSNIIFTRGHSIVGIGSAMYMRDGTTGAPSSGDEIKFF
Physico‐chemical
properties
protein length:159 AA
molecular weight: 17056,73210 Da
isoelectric point:5,28332
aromaticity:0,07547
hydropathy:-0,38994

Domains

Domains [InterPro]
DC_0018
ATT
3–155
DC_0018
G3DSA:2.10.10.80
ATT
34–103
G3DSA:2.10.10.80
IPR040775
RBD
37–93
IPR040775
YP_009889341.1
1 159
Architecture
ATT
ATT 3-155 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
YP_009889341.1
1 159
Domain Start End Length (AA) Confidence
N-terminal 1 155 155 0,9936
Central domain 156 155 1 0,4870
C-terminal 156 159 3 0,3729
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-155
Central
156-155
C-terminal
156-159

Taxonomy

  Name Taxonomy ID Lineage
Phage Salmonella phage P46FS4
[NCBI] 		2712940 Uroviricota > Caudoviricetes > Pantevenvirales > Aglimvirinae > Agtrevirus
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_009889341.1 [NCBI]
Genbank nucleotide accession
NC_049509.1 [NCBI]
CDS location
range 2503 -> 2982
strand +
CDS
ATGAATCCGCAATTCAATCAGCCGAAAGGTTCAACAGCCAAAGAAATCAACAAAAACCCGCGTGAATTGTGGCGGCGGGCTTTGTCGGATTTAGGTCTTAATTTGGTCGAAGGTAGTTTTGAAGACGGTGCTACTGTGACGACTGCAACCGACGCCGTGTGGCATATCAATGGTGCCCAGTGTTATACCTGGGGTGGGTCTTTGCCCAAGACTGTGAACAAAAACTCAACACCTGGAACGGAAGGTGGGATTGGTGCAGGGCAATGGTCTGACGTGAAAGATATTTCTTTACGCAATCACCTGGAAGGTCGCTTGGTCTTGGTGGTAGATTCCTTTTCTGATGCCGTTCTGTCTGACCCAGATAATTCAAACATTATTTTTACACGTGGGCATTCAATCGTCGGGATTGGTTCTGCGATGTATATGAGGGACGGGACTACAGGGGCGCCATCATCTGGTGATGAAATTAAGTTTTTTTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
032ecd037547a5e22789a700de66eadce9b3b5d0e002b7ad4ae97a3967efe679
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6323
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50