Protein

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Genbank accession
YP_010748234.1 [GenBank]
Protein name
tail spike protein
RBP type
TSP
Evidence UniProt/TrEMBL
Probability 1,00
TF
Evidence GenBank
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
TSP
Evidence RBPdetect2
Probability 0,96
Protein sequence
MSSGCGEVMSLNDLQIAKKHQIFEAEVITGKQGGVAGGADIDYATNPVTGQTQKTLPAVLRDVGFSPASFNFTTGGTLGADDADKAVLWPKEDGGDGNYYAWRGSLPKVIPAASTPLTTGGISDSAWVAFGDITFRAEADKKFKYSVKLSDFTTLQQLADAAVDSVLIDRDYNFSNNETVNFGGKTLTIDCKAKFIGDGNLVFTQLGKGSIVVGAFMESVTTPWVIKPWTDNNEWITDPAAIVATLKQSKTDGYQPTVNDYVKFPGIESLLPPEAKDQNISSVLEIRECTGVEIHRASGLMACFLFRGCHFCKMVDADNPSGGKDGVITFENLSGDWGKGNYVIGGRTSYGSVSSAQFLRNNGGFERDGGVIGFTSYRAGESGVKTWQGTVGSTTSRNYNLQFRDSAVLYPVWDGFDLGADTDMNPEDDRPGDFPYSQYPVHMLPLNHLIDNLLVRGSLGVGFGMDGKGLYVSNITVEDCAGSGAYLLTHETVFTNIAIIDTNTKDFPANQIYISGACRVNGLRLVGLRSTSGSGMMIDAPNSTVCGITGFVDPSRINVADLMDVGLGNTMINSFNSDSAALRLRIHKLSKTLDSGSVYSHINGGPGSGSAWTEITAIAGSLPDAVSLKINRGDYRAVEIPVSVTALPDNAVRDNGSISMYLEGNSLRALAKRADGSYVRFILAQV
Physico‐chemical
properties
protein length:686 AA
molecular weight: 73231,28620 Da
isoelectric point:4,97474
aromaticity:0,08892
hydropathy:-0,13440

Domains

Domains [InterPro]
G3DSA:2.10.10.80
ATT
65–135
G3DSA:2.10.10.80 IPR011050
G3DSA:2.10.10.80
ATT
65–130
G3DSA:2.10.10.80 IPR012332
IPR040775
RBD
86–132
IPR040775 IPR012332
IPR015331
RBD
138–684
IPR015331
YP_010748234.1
1 686
Architecture
ATT
STR
ATT 65-135 | STR 136-686
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
YP_010748234.1
1 686
Domain Start End Length (AA) Confidence
N-terminal 1 154 154 0,9943
Central domain 155 594 441 0,9816
C-terminal 595 686 91 0,8303
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-154
Central
155-594
C-terminal
595-686

Taxonomy

  Name Taxonomy ID Lineage
Phage Salmonella phage fmb-p1
[NCBI] 		2849081 Uroviricota > Caudoviricetes > Sarkviridae > Jerseyvirus > Jerseyvirus fmbp1
Host Salmonella typhimurium
[NCBI] 		90371 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_010748234.1 [NCBI]
Genbank nucleotide accession
NC_073210.1 [NCBI]
CDS location
range 17975 -> 20035
strand -
CDS
ATGTCTAGTGGTTGCGGTGAGGTAATGTCACTTAACGATTTACAGATAGCTAAAAAACACCAGATTTTCGAAGCCGAGGTTATCACCGGTAAACAAGGCGGTGTAGCCGGCGGTGCAGATATCGACTACGCCACTAACCCGGTAACCGGGCAGACGCAGAAGACCCTGCCTGCGGTTTTACGTGATGTTGGTTTCTCCCCGGCGTCTTTCAACTTCACAACCGGCGGGACCCTGGGAGCTGACGACGCGGATAAAGCGGTTCTTTGGCCGAAAGAAGATGGCGGGGACGGTAACTATTACGCATGGCGTGGCTCCCTGCCGAAAGTTATCCCCGCGGCGTCTACCCCTCTAACAACCGGTGGCATTTCTGATTCTGCTTGGGTAGCTTTTGGGGACATCACCTTCCGTGCGGAAGCGGATAAGAAATTTAAGTACTCCGTTAAGCTGTCTGACTTTACTACGTTACAACAATTGGCAGACGCCGCCGTTGATAGTGTTCTTATCGACCGCGATTACAACTTCAGCAATAATGAGACCGTTAACTTCGGCGGGAAGACACTGACCATCGACTGTAAAGCGAAGTTTATCGGCGACGGAAACCTGGTATTTACGCAATTAGGTAAAGGTTCCATCGTAGTAGGCGCTTTTATGGAAAGCGTCACGACTCCGTGGGTGATAAAACCCTGGACTGACAATAATGAGTGGATAACTGACCCCGCTGCGATTGTAGCAACACTGAAACAGTCTAAAACAGATGGATACCAGCCGACGGTAAACGATTATGTCAAGTTTCCGGGTATAGAATCACTTCTCCCACCGGAAGCTAAAGACCAAAACATCTCGTCTGTCCTTGAGATACGGGAATGCACGGGCGTTGAGATTCATCGGGCTAGCGGTCTTATGGCGTGCTTCCTGTTCCGCGGGTGCCATTTCTGTAAGATGGTAGACGCCGACAACCCGAGCGGCGGGAAGGACGGCGTAATTACCTTCGAAAACCTGAGCGGCGACTGGGGTAAGGGTAACTATGTCATTGGTGGTAGGACCAGCTACGGGTCCGTAAGTAGCGCCCAGTTTTTACGCAACAACGGCGGATTTGAGCGCGACGGCGGGGTCATCGGGTTTACCTCGTATCGCGCCGGCGAAAGTGGTGTTAAAACATGGCAAGGTACTGTGGGCTCGACAACCTCTCGCAACTATAATCTGCAATTCCGTGATTCCGCGGTTTTATACCCAGTATGGGATGGCTTCGATTTAGGTGCGGATACCGACATGAATCCGGAAGATGATCGCCCGGGGGATTTCCCGTATTCTCAATACCCGGTACATATGCTCCCTCTAAACCATTTGATCGACAATCTACTGGTCAGGGGTTCTTTGGGGGTAGGTTTCGGCATGGATGGGAAAGGTCTGTATGTCTCAAATATAACAGTAGAGGACTGTGCAGGTTCGGGTGCATATCTTCTTACGCACGAAACGGTATTCACTAATATTGCTATAATCGACACAAATACTAAGGATTTTCCAGCGAACCAGATATACATTTCCGGGGCATGCCGTGTGAACGGCCTTCGTTTGGTGGGCCTACGCTCCACTAGTGGGTCGGGAATGATGATAGACGCTCCTAACTCCACTGTGTGCGGTATAACCGGTTTCGTCGACCCATCAAGAATCAATGTGGCTGATTTAATGGATGTAGGCCTTGGTAACACAATGATTAACAGCTTTAATAGTGATTCTGCGGCGTTGCGGCTACGGATACATAAACTGTCAAAGACTCTTGATAGCGGTTCAGTGTATTCCCACATAAACGGTGGACCCGGTTCTGGTTCAGCATGGACCGAAATTACCGCTATTGCGGGGTCCTTGCCTGATGCCGTGTCATTAAAAATAAACAGGGGCGATTATCGTGCTGTTGAGATACCGGTATCGGTGACCGCCCTACCAGACAACGCTGTTCGAGATAACGGGTCTATATCCATGTATTTAGAAGGTAATAGCCTTAGGGCGTTGGCTAAGCGGGCGGACGGAAGTTATGTAAGATTTATTTTGGCACAAGTCTAG

Genome Context

Genome Context

Tertiary structure

PDB ID
27a45dc772eac54dcc6b710e238eb8b00e01c35db3a6d8e99ac930980feb0e08
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6885
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50