Protein

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Genbank accession
GENB_5d251a9ec006 [GenBank]
Protein name
tail spike protein
RBP type
TSP
Evidence DepoScope
Probability 0,99
Protein sequence
MAFNYTPLTETQKLKDMYPKVNDIGNFLKTEVNLSDVKQISQPDFNNILASIPDSGNYYVTNSKGAPSGEATAGFVRLDKRNVNYYKIYYSPYSSNKMYIKTYANGTVYDWISFKLDEGSLYNEGNTLNVKELTESTTQYATLVNPPKENLNTGWVNYKESKNGVSSLVEFNPVNSTSTFKMIRKLPVQEQKPNLLKDSLFVYPETSYSNIKTDNWDTPPFWGYSSNSGRSGVRFRGENTVQIDDGSDTYPSVVSNRFKMGKELSVGDTVTVSVYAKINDPALLKDNLVYFELAGYDTVDDTSKNPYTGGRREITASEITTEWKKYSFTFTIPENTIGASGVKVNYVSLLLRMNCSSSKGNGAVVYYALPKLEKSSKVTPFITHENDVRKYDEIWSNWQEVISKDELKGHSPVDIEYNDYFKYQWWKSEVNEKSLKDLAMTVPQGYHTFYCQGSIAGTPKGRSIRGTIQVDYDKGDPYRANKFVKLLFTDTEGIPYTLYYGGYNQGWKPLKQSETSTLLWKGILDFGSTEAVNLNDSLDNYDLIEVTYWTRSAGHFSTKRLDIKNTSNLLYIRDFNISNDSTGSSVDFFEGYCTFPTRTSVQPGMVKSITLDGSTNTTKVASWNEKERIKVYNIMGINRG
Physico‐chemical
properties
protein length:640 AA
molecular weight: 72544,13820 Da
isoelectric point:6,52798
aromaticity:0,12813
hydropathy:-0,60016

Domains

Domains [InterPro]
DC_0568
STR
5–407
DC_0568
cd19958
STR
44–111
cd19958 G3DSA:2.60.120.260 DC_0448
IPR003305
CBM
228–337
IPR003305
GENB_5d251a9ec006
1 640
Architecture
STR
STR 5-639 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
GENB_5d251a9ec006
1 640
Domain Start End Length (AA) Confidence
N-terminal 1 293 293 0,6063
Central domain 294 505 213 0,2315
C-terminal 506 640 134 0,9698
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-293
Central
294-505
C-terminal
506-640

Taxonomy

  Name Taxonomy ID Lineage
Phage Staphylococcus phage vB_SpsM-DS10
[NCBI] 		2924917 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
OM373557.1_CDS_[81720..83642] [NCBI]
Genbank nucleotide accession
OM373557.1 [NCBI]
CDS location
range 81720 -> 83642
strand +
CDS

  




        

        
      
    
  






  

  
  

    
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Tertiary structure


  



  

    

      
        
          
            
              

                

                  

                    

                      
PDB ID

                      
989342e6207a5ec8e3616d1c9d08770755e59844b05cc886cf01a07cb0c7e64c

                    

                    
                      ESMFold
                    
                  

                  

                  

                    

                      Source
                      ESMFold
                    

                    

                      Method
                      ESMFold
                    

                    

                      Resolution
                      0,7073
                    

                    

                      Oligomeric State
                      monomer
                    

                    
                  

                  

                    
                      Download PDB
                    
                  

                  
                  
                  
                

                
                
                

                  

                    
                      
Model Confidence

                      

                        

                          

                          Very high
pLDDT > 90
                        

                        

                          

                          High
90 > pLDDT > 70
                        

                        

                          

                          Low
70 > pLDDT > 50
                        

                        

                          

                          Very low
pLDDT < 50