Protein

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Genbank accession
APC45007.1 [GenBank]
Protein name
tail fiber adhesin
RBP type
TF
Evidence GenBank
Probability 1,00
TF
Evidence RBPdetect
Probability 0,83
Protein sequence
MAVTGPWVGSSAVVNTGQNWMGGAAQRLRMGAPFWMSNMIGRSVEIIHTLGADHNFNGQWFRDRCFEAGSAPIVFNITGNLVSYSRDVPLFFMYGDTPNEYVQLNIGAGAHMWGRGGQGGWTHSGGDGNGQQGGHCIQNDIGGRLRINNGGVICGGGGGGGGIAYRPHSGANWQDIGGGGGRPFGPGGGGGYSGGAASYDGPGGGYNYGNAHSGQGGDAGANGQNAWHDGGKVLKVGAGGAAGYAVIGSAPTWQNVGIIYGPRV
Physico‐chemical
properties
protein length:264 AA
molecular weight: 26715,04500 Da
isoelectric point:7,80469
aromaticity:0,10227
hydropathy:-0,30947

Domains

Domains [InterPro]
IPR048291
ATT
1–40
IPR048291 IPR007932
DC_2135
STR
1–139
DC_2135
APC45007.1
1 264
Architecture
ATT
STR
RBD
ATT 1-40 | STR 41-139 | RBD 140-264
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Shigella phage SH7
[NCBI] 		1913049 Uroviricota > Caudoviricetes > Pantevenvirales > Tevenvirinae > Tequatrovirus
Host Shigella sp.
[NCBI] 		625 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
APC45007.1 [NCBI]
Genbank nucleotide accession
KX828711.1 [NCBI]
CDS location
range 154889 -> 155683
strand +
CDS
ATGGCAGTAACAGGACCGTGGGTAGGATCGTCTGCAGTAGTTAATACAGGACAAAATTGGATGGGCGGCGCGGCCCAACGATTAAGAATGGGTGCTCCATTTTGGATGAGTAATATGATAGGTCGATCTGTTGAAATAATTCACACGCTTGGAGCAGACCATAACTTCAATGGTCAATGGTTCCGAGATAGATGTTTTGAGGCAGGTAGTGCACCTATAGTGTTTAATATCACCGGAAATTTGGTATCATATTCCAGAGACGTTCCTTTATTCTTCATGTACGGAGATACACCTAATGAATATGTTCAATTAAATATTGGTGCTGGAGCTCATATGTGGGGTAGAGGTGGACAAGGTGGATGGACTCATTCTGGTGGAGATGGTAATGGTCAACAGGGTGGACATTGTATTCAAAATGACATTGGTGGTCGATTAAGAATTAATAACGGCGGAGTAATTTGTGGCGGTGGTGGCGGTGGTGGCGGTATCGCTTATCGTCCTCACTCTGGTGCAAACTGGCAGGATATTGGTGGCGGTGGAGGAAGACCATTTGGCCCAGGAGGTGGCGGTGGTTATTCAGGAGGTGCTGCTTCTTATGACGGCCCAGGAGGTGGTTATAATTATGGTAATGCTCATTCTGGCCAGGGCGGTGATGCTGGCGCAAATGGACAAAATGCCTGGCATGATGGCGGTAAAGTACTAAAAGTCGGTGCTGGCGGGGCCGCAGGTTATGCTGTCATAGGGTCTGCTCCAACATGGCAAAATGTTGGAATAATATATGGTCCAAGAGTATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
00765d8d26738baae204ce8704a28a640920433359d1fbdb88a7208341cb625e
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8256
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Characterization of two polyvalent phages infecting Enterobacteriaceae Hamdi,S., Rousseau,G.M., Labrie,S.J., Tremblay,D.M., Kourda,R.S., Slama,K.B. and Moineau,S. — — GenBank