Protein

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Genbank accession
YP_010746472.1 [GenBank]
Protein name
tail-spike protein
RBP type
TSP
Evidence UniProt/TrEMBL
Probability 1,00
TSP
Evidence Phold
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
TSP
Evidence RBPdetect2
Probability 0,95
Protein sequence
MSSGCGDVMSLNDLQIAKKHQIFEAEVITGKQGGVAGGADIDYATNPVTGQTQKTLPAVLRGAGFSPASFNFTTGGTLGVNDADKAVLWPKEDGGDGNYYAWRGSLPKVIPAASTPLTTGGISDSAWVAFGDITFRAEADKKFKYSVKLSDFTTLQQLADAAVDSILIDRDYNFSNNETVNFGGKTLTIDCKAKFIGDGSLVFTQLGRGSVIVGAYMESVTTPWVIKPWTDDNQWITDPAAIVATLKQSKTDGYQPTVNDYAKFPGIESLLPPEAKGQSISSTLEIRECTGVEVHRASGLMACFLFRGCHFCKMVDADNPSGGKDGVITFENLSGDWGKGNYVIGGRTSYGSVSSAQFLRNNGGFERDGGVIGFTSYRAGESGVKTWQGTVGSTTSRNYNLQFRDSVVLYPVWDGFDLGADTDMNPEADRPGDYPVSQYPVHMLPLNHLIDNLLVRGCLGVGFGMDGQGLYVSNITVEDCAGSGAYLLTHETVFTNIAVIDTNTKDFPANQIYISGACRVNGLRLIGIRSTAGQGLTIDAPNSTVSGITGFVDPSRINVANLMEEGLGNTRINSFNNDSAALRLRIHKLTKTLDSGSVYSHINGGPGSGSAWTEITAISGSLPDAVSLKINRGDYRAVEIPVAMTVLPDNAVRDNGSISLYLEGDSLKALVKRADGSYTRLTLA
Physico‐chemical
properties
protein length:684 AA
molecular weight: 72857,77770 Da
isoelectric point:5,11093
aromaticity:0,08626
hydropathy:-0,15307

Domains

Domains [InterPro]
G3DSA:2.10.10.80
ATT
65–135
G3DSA:2.10.10.80 IPR011050
G3DSA:2.10.10.80
ATT
65–130
G3DSA:2.10.10.80 IPR012332
IPR040775
RBD
71–132
IPR040775 IPR012332
IPR015331
RBD
138–684
IPR015331
YP_010746472.1
1 684
Architecture
ATT
STR
ATT 65-135 | STR 136-684
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
YP_010746472.1
1 684
Domain Start End Length (AA) Confidence
N-terminal 1 154 154 0,9939
Central domain 155 629 476 0,9769
C-terminal 630 684 54 0,9316
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-154
Central
155-629
C-terminal
630-684

Taxonomy

  Name Taxonomy ID Lineage
Phage Salmonella phage 5sent1
[NCBI] 		2762669 Uroviricota > Caudoviricetes > Sarkviridae > Jerseyvirus > Jerseyvirus jv5sent1
Host Salmonella gallinarum
[NCBI] 		594 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_010746472.1 [NCBI]
Genbank nucleotide accession
NC_073181 [NCBI]
CDS location
range 23903 -> 25957
strand +
CDS
ATGTCCAGCGGTTGCGGTGATGTAATGTCACTTAATGATTTACAGATAGCCAAAAAACACCAGATTTTCGAAGCCGAGGTGATCACCGGTAAACAAGGCGGTGTAGCCGGCGGTGCAGATATCGACTACGCCACTAACCCGGTAACCGGGCAGACGCAGAAGACGCTTCCCGCAGTCTTACGTGGTGCTGGTTTCTCCCCGGCATCTTTTAATTTTACGACCGGGGGTACTCTCGGCGTAAACGACGCAGATAAAGCTGTTCTTTGGCCGAAAGAAGATGGTGGAGACGGTAACTACTACGCATGGCGTGGCTCCCTGCCGAAAGTTATCCCTGCGGCGTCGACACCTCTTACGACGGGCGGCATTTCGGATTCCGCTTGGGTCGCGTTCGGAGATATTACCTTTCGCGCGGAAGCGGATAAGAAATTTAAATACTCCGTTAAGCTGTCCGACTTTACTACGTTACAACAACTGGCGGATGCTGCCGTCGACAGTATTCTTATCGACCGTGACTACAATTTCAGCAATAACGAAACCGTTAATTTTGGCGGTAAGACCCTAACCATCGACTGTAAAGCGAAATTTATTGGCGACGGTAGCCTTGTTTTTACACAACTTGGTAGAGGGTCTGTTATAGTTGGTGCTTATATGGAGAGTGTCACAACGCCGTGGGTGATTAAACCGTGGACTGACGATAATCAGTGGATAACCGACCCCGCGGCAATCGTGGCCACACTTAAACAGTCTAAAACAGATGGATACCAGCCGACGGTAAACGATTACGCCAAGTTCCCTGGCATAGAATCCCTTCTCCCCCCGGAAGCTAAAGGGCAAAGCATATCTTCTACCCTGGAAATTCGGGAATGTACAGGCGTCGAGGTTCACCGGGCGAGTGGTCTTATGGCGTGTTTCCTGTTCCGTGGATGCCATTTCTGTAAGATGGTAGACGCTGACAACCCGAGCGGCGGTAAGGATGGGGTAATTACCTTCGAAAACTTGAGCGGGGATTGGGGTAAAGGAAACTATGTCATTGGCGGGCGTACAAGTTACGGTTCGGTAAGTAGCGCCCAGTTTTTACGTAATAATGGTGGCTTTGAACGTGATGGTGGGGTTATTGGGTTTACCTCATACCGTGCCGGCGAGAGCGGAGTTAAGACATGGCAGGGGACTGTAGGTTCCACAACGTCACGAAATTATAATCTTCAATTCCGCGATTCCGTAGTTTTGTACCCGGTATGGGACGGATTCGATTTAGGCGCAGATACCGACATGAACCCGGAAGCAGATAGGCCGGGGGATTACCCTGTATCTCAGTACCCAGTACATATGCTCCCGTTAAACCATTTGATTGATAACTTGTTGGTTAGAGGGTGTTTAGGAGTTGGCTTCGGCATGGATGGGCAAGGGCTATACGTTTCTAACATAACCGTAGAAGATTGCGCTGGCAGTGGAGCATATCTGTTGACGCATGAAACAGTATTCACAAACATTGCGGTAATAGACACGAATACTAAAGACTTTCCTGCTAATCAGATTTACATTTCAGGGGCTTGCCGTGTTAATGGGCTGCGCTTGATAGGCATCCGGTCTACCGCAGGCCAAGGGTTAACAATAGACGCGCCAAACAGTACAGTTAGCGGAATAACTGGATTCGTCGACCCATCAAGAATTAACGTGGCCAATCTAATGGAAGAAGGTCTGGGAAACACACGTATAAATAGTTTCAATAATGATAGCGCGGCCCTGCGACTCAGAATACATAAGCTAACGAAAACTTTGGATAGTGGGTCAGTGTACTCCCACATTAACGGTGGTCCCGGTTCTGGTTCAGCATGGACTGAAATTACAGCTATTTCTGGGTCGTTGCCGGATGCGGTGTCCCTAAAAATTAACCGTGGCGATTATCGTGCTGTTGAGATACCGGTAGCGATGACCGTCCTACCAGACAACGCTGTCAGGGATAACGGGTCTATATCACTGTATCTGGAGGGCGATAGCCTTAAAGCGTTAGTTAAGCGGGCCGACGGAAGCTATACAAGATTAACTTTGGCATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
ff34fcd3c6573482e89c4e4f5f7519f66b85bd0577436863bececbcbf6f1e8cc
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6914
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50