Protein

View in Explore
Genbank accession
GENB_c3d97fc0da7c [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,72
TF
Evidence RBPdetect2
Probability 0,95
Protein sequence
MATLKSIQFKRSKIAGAKPTAAQLDEGELAINLRDRTIFTKSDQGQIIDLGFAKGGQVDGDVNINGTLNLNGELVQTGTAGMRTEGSITAPVFRASKGSFYSRASNDTSNAHYWFENANGTERGVLYAKPQLENEGVITMRVRQGTAAGAQNSEFHFISNDGGIFQARKLAALTSISTPTISVNLVNHDSKTFGQYDSQSLVNYVYPGTGETNGVNYLRKVRAKSGGTMWHELCTAQLGQADEMSWWTGNTPQSKQYGVRNDGRLIGRNSLALGTMTTDFPSSDYGNTGAMGDKYLVLGDTATGLKYIKQGNFDLVGGGYSVASITTDGFRGTSKTIFGRSNDQGLTWLLPGQNSSMVSIRTEIDGNNSGDGQTHLGYNSNGKLYHYFRGTGRVAISMAEGMIIEPGILNIKTGVNELNLRADGTVSTTQRLMVNNGLVLNANNNTSALALTAPTGVDGTKTINWDAGTRNGQNKNTVTMKAWGNSFNAGGGNRETVFEVSDSQGYYFYGQRTNPASGETVGPINFKFNGSVETGHFSSLGNISASGTGSFGGNVTMTNGLFVQGGASISGQVKMGGTADALRIWNAEYGLIFRRSETGSSASFHLIPTLQNAGENGGISDLRPLSINLANGTVIMGNKSTGGPLFTVDNVSKFVQTDCRLRVNMDSDGIVLNASSQAASNFIQGRKADVTKWYLGIGDGGNVVRLHNYTYSHGIALNSDTVDITKPLKIGSDIRIGTDGNITGSSTLDNFKNLNSTLDHKVNMGGWSGGATTGWYKFATVEIPQSTGTVSFKIFGGSGFNFKSYGQASIAEIILRTGNNNPKGLNATLWNRTSEAISQIASVNTSEDIYDIYVYLGGYSNSLVVEYTCSSNSKVTVVGMDSGIQPLVETLPEGHIVGKSVRMLNNIDGMFAAGESDIVTRGEYVTNNQKGMRIKSKGNDLDSNAALLRNDGGSFYILATDKNTTEKPDAANGDWNGLRPFSINMADGRVGMNHGLNITGGGLNVTGGNTNLGNITSRVVSSARSPAGWGDNSDAMKPKITFMADHGDLSNSGSYYPIVGAWSNYGSAGYRQTFEFGWVGSGTTAGWRDGIIRIRGDNANGQQARWRFVMDGTLECPGKVLLPQTSAFGINTINGFGGNSLVIGDSDTGFRQVGDGLLEVWTNASRRMRFQGGDTYSDMNINAPNVYIRSDIRLKSNFKPIENALEKVEQLDGLIYDKADYIGGEVVHTEAGVIAQKLNEVLPEAIREVEDIKGNKVLTVSTQAQVALLIEAVKTLSAKVKELEAKLN
Physico‐chemical
properties
protein length:1288 AA
molecular weight: 137564,51460 Da
isoelectric point:6,77017
aromaticity:0,08075
hydropathy:-0,33750

Domains

Domains [InterPro]
DC_1954
STR
1–882
DC_1954 DC_0128 DC_1942
G3DSA:6.20.80.10
STR
669–726
G3DSA:6.20.80.10 IPR030392
IPR048388
ATT
669–750
IPR048388 IPR030392 Coil
Coil
Unmapped
1235–1255
Coil
GENB_c3d97fc0da7c
1 1288
Architecture
STR
ATT
STR
RBD
ATT
STR 1-668 | ATT 669-750 | STR 751-882 | RBD 912-1042 | ATT 1077-1287 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
GENB_c3d97fc0da7c
1 1288
Domain Start End Length (AA) Confidence
N-terminal 1 707 707 0,0345
Central domain 708 914 208 0,6131
C-terminal 915 1288 373 0,8055
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-707
Central
708-914
C-terminal
915-1288

Taxonomy

  Name Taxonomy ID Lineage
Phage Dhakavirus CLBP2
[NCBI] 		3108099 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
OZ035781.1_CDS_[63836..67702] [NCBI]
Genbank nucleotide accession
OZ035781.1 [NCBI]
CDS location
range 63836 -> 67702
strand +
CDS

  




        

        
      
    
  






  

  
  

    
Genome Context

  


  

    

      
Genome Context

      

    

  


  

  


  

  

  
  

  


  

    
Tertiary structure


  



  

    

      
        
          
            
              

                

                  

                    

                      
PDB ID

                      
a5995e7d21409921223434a91277940ec9110e7efc514881f3ad055340054e2d

                    

                    
                      ESMFold
                    
                  

                  

                  

                    

                      Source
                      ESMFold
                    

                    

                      Method
                      ESMFold
                    

                    

                      Resolution
                      0,5157
                    

                    

                      Oligomeric State
                      monomer
                    

                    
                  

                  

                    
                      Download PDB
                    
                  

                  
                  
                  
                

                
                
                

                  

                    
                      
Model Confidence

                      

                        

                          

                          Very high
pLDDT > 90
                        

                        

                          

                          High
90 > pLDDT > 70
                        

                        

                          

                          Low
70 > pLDDT > 50
                        

                        

                          

                          Very low
pLDDT < 50