Protein
View in Explore- Genbank accession
- WFS86130.1 [GenBank]
- Protein name
- endopeptidase
- RBP type
-
TSP
- Protein sequence
-
MSLMEMESVNNLINKNYLRLSMSENVTNGYYAIVSDLVELKENSDYILQFKCIPKKEKNIIIKIKGNETIEQIGEIILQESVVFEEINGIKEYLCVLRFSNTKKQKVAMMFGIENNNDFSANETIFDIREIALQEGELLLPYQENSFENNSKITLLNGKFELLADKFEAGISKVEKDITGLEEKTDAKIKIESDKITQEVKSVAEGNFIVNGAFETGDIFGWNVGGTRTIVEGYNYYGETLNYINIDVPQKGTSTWSNRFEVVENTYIQFSGLFFNEIGNTTTIKIKFSKSVLNANDREESGNFDTEKLLETWIAESNDFVEKFYSLVVPVGSKTAFIEIGYNGTGKTGWTKIMSTKGQRKIDYMPKTTNYSLVTQQLTPNSIINSVNKGLTEGGAISVASTILDENGFSQLNNGKLSVRLNNNGVHVYSFLNESKINGSIIALRSTATGDDVIGFVNENNSYLTISYSKDASTYNSYMVLDKFGLLNPIPITYYEEQDFYSNKVWLSKKTGNGSNFFGWTDGKGRGSSAWYTRSFYLMDSASNDSLFTIDSDDAYFGANSVLFKRNVTINGDLNVSGNKNCIQHTKFGDVPFYANEDINSLLTETDTDNIYTTELIEGKYICRIEIDEIIQECINTMLPYNIYIDKLSWGDYKIEIREKDYFIVESDREMKFKYKLEGKRKGFEHENKENNFMQKATVQKPSQETETPSIQKREKEIIHKKPINEFWELYRCNNCN
- Physico‐chemical
properties -
protein length: 737 AA molecular weight: 83966,34810 Da isoelectric point: 4,95132 aromaticity: 0,11262 hydropathy: -0,46649
Domains
Domains [InterPro]
DC_1054
STR
1–737
STR
1–737
Coil
Unmapped
164–184
Unmapped
164–184
1
737
Architecture
STR 1-737
Legend:
ATT
STR
RBD
CBM
LEC
ENZ
CHP
LNK
TAS
TTP
UNK
Unmapped
Tail Spike Domain Segmentation
Tail Spike Domain Segmentation
This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.
Domain Layout
1
737
| Domain | Start | End | Length (AA) | Confidence |
|---|---|---|---|---|
| N-terminal | 1 | 257 | 257 | 0,4920 |
| Central domain | 258 | 456 | 200 | 0,3639 |
| C-terminal | 457 | 737 | 280 | 0,7371 |
Legend:
N-terminal
Central domain
C-terminal
3D Structure with Domain Coloring
The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).
Domain Coloring
N-terminal
1-257
1-257
Central
258-456
258-456
C-terminal
457-737
457-737
Taxonomy
| Name | Taxonomy ID | Lineage | |
|---|---|---|---|
| Phage |
Clostridium phage vB_CpeS-17DYC [NCBI] |
3038269 | Viruses > unclassified bacterial viruses > |
| Host |
Clostridium perfringens [NCBI] |
1502 | cellular organisms > Bacteria > Bacillati > Bacillota > Clostridia > Eubacteriales |
Coding sequence (CDS)
Coding sequence (CDS)
Genbank protein accession
WFS86130.1
[NCBI]
Genbank nucleotide accession
OQ717002
[NCBI]
CDS location
range 25332 -> 27545
strand +
strand +
CDS
ATGAGTTTGATGGAAATGGAATCTGTAAACAACCTTATTAATAAAAACTATCTAAGGCTCTCTATGAGTGAAAATGTTACAAATGGTTATTATGCTATTGTAAGTGATTTGGTGGAATTGAAAGAGAATTCAGATTATATACTACAATTTAAATGTATTCCTAAAAAAGAAAAGAATATAATAATAAAAATTAAAGGAAATGAAACAATAGAACAAATTGGAGAAATAATTCTTCAAGAGAGTGTTGTTTTTGAAGAAATTAATGGAATTAAAGAATATCTATGTGTTTTGAGATTTTCAAATACAAAAAAGCAAAAGGTTGCTATGATGTTCGGAATAGAAAATAATAATGATTTTTCAGCTAACGAAACTATTTTTGATATAAGGGAAATTGCGTTACAAGAAGGCGAATTACTACTTCCTTACCAAGAAAATTCGTTTGAAAACAATAGCAAAATAACTTTGTTAAATGGTAAATTTGAATTGCTTGCTGATAAATTTGAAGCTGGTATAAGTAAAGTAGAAAAAGATATAACAGGTTTAGAAGAGAAGACGGATGCTAAGATTAAAATAGAAAGCGATAAAATAACACAAGAAGTTAAAAGTGTTGCAGAAGGAAATTTTATTGTAAATGGAGCATTTGAAACTGGAGATATTTTTGGTTGGAACGTCGGCGGTACAAGAACTATAGTAGAAGGATATAATTATTATGGCGAAACGTTAAATTATATAAATATAGATGTACCACAAAAAGGCACTTCAACATGGAGTAATAGGTTTGAAGTGGTCGAAAACACATATATACAATTTAGTGGGCTTTTTTTTAATGAAATAGGTAACACTACAACCATTAAGATAAAGTTTTCTAAAAGTGTTTTAAATGCAAATGATAGAGAGGAAAGTGGTAATTTTGATACTGAAAAATTACTTGAAACTTGGATTGCTGAAAGTAATGATTTTGTTGAAAAGTTTTATAGTTTAGTTGTGCCGGTTGGTTCTAAAACTGCATTTATAGAAATTGGTTATAATGGAACTGGTAAAACAGGGTGGACTAAAATCATGTCTACTAAAGGGCAAAGAAAAATTGACTATATGCCAAAAACTACAAATTATAGCCTTGTAACTCAACAGTTAACACCTAATTCGATTATAAATAGTGTAAACAAAGGTCTTACAGAAGGTGGAGCTATAAGTGTTGCGAGTACGATTTTAGATGAAAACGGATTTTCTCAATTAAATAATGGAAAATTATCTGTAAGATTAAATAACAATGGTGTGCATGTATATTCATTTTTAAACGAAAGCAAAATAAACGGTTCTATCATCGCATTAAGGTCTACTGCGACGGGCGATGATGTAATTGGTTTTGTAAATGAAAACAACTCTTATCTAACTATAAGTTATAGCAAAGACGCTTCAACTTACAACTCTTATATGGTTTTAGATAAATTTGGACTTCTTAATCCGATACCAATAACATATTATGAAGAACAAGATTTTTACAGTAACAAAGTTTGGTTATCAAAAAAAACAGGGAATGGAAGTAATTTTTTTGGTTGGACAGATGGGAAAGGAAGAGGTTCATCAGCGTGGTACACCAGAAGCTTTTATTTAATGGATTCAGCAAGTAATGATTCTTTATTTACAATAGATTCAGACGACGCTTATTTTGGAGCGAATTCGGTTTTATTTAAAAGAAATGTCACTATAAACGGCGATTTAAATGTAAGTGGCAACAAAAACTGTATTCAGCATACTAAATTCGGAGATGTTCCGTTCTACGCGAATGAGGATATCAATTCATTGTTAACAGAAACAGATACTGATAACATCTATACAACAGAATTAATTGAAGGGAAATATATTTGCAGAATTGAAATAGATGAAATAATTCAAGAGTGTATCAACACAATGTTACCTTATAACATTTATATAGATAAATTAAGTTGGGGAGATTATAAAATTGAAATTAGAGAGAAAGATTATTTTATAGTTGAATCTGATAGAGAAATGAAATTTAAATATAAATTAGAAGGAAAAAGAAAAGGGTTTGAACATGAAAATAAAGAAAATAATTTTATGCAAAAAGCTACAGTCCAAAAACCTTCTCAAGAAACTGAAACACCATCGATACAAAAAAGAGAGAAAGAAATTATCCATAAAAAGCCGATTAATGAATTCTGGGAGTTATATCGTTGCAATAATTGTAATTAA
Genome Context
Genome Context
Tertiary structure
PDB ID
824b74c4ce576171a7133eed4fab74ea772348366721a171dd5f65bcff1c8abe
Model Confidence
Very high
pLDDT > 90
pLDDT > 90
High
90 > pLDDT > 70
90 > pLDDT > 70
Low
70 > pLDDT > 50
70 > pLDDT > 50
Very low
pLDDT < 50
pLDDT < 50