Protein

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Genbank accession
ALM64135.1 [GenBank]
Protein name
receptor binding protein 1
RBP type
TSP
Evidence RBPdetect
Probability 0,71
Protein sequence
MTITKYTFFSPNGNDFPVTANADAKLYMALGNLDYTTFSRVDWSNTTQAGLTKTFVKTSFVVAGRFFQAENELVQLHPAATNFIHAVIDLSTPLNPVKFTSETTDNSNTIDINNSSGIYKRCVEKIVTNSGSIISTEKIAQNRIFDIATIKKAVINTANVVNSNVSGTTNLNTLNTSGKAVLSILEVKNSTLLKNTTISGNLTVSGVTTSKYFTATESVTSKNVTSKNVTSNNVIAENAITSKNVIAENTLIVKAVKGKRSEQFQTPTTYATITGTALKFFTLYKSANVVTCNFGGTPTSGSIPGGGAIVGWITDNAFKPEHTQNFTVFAANGQRCRFTVDPGGAVRSHEPVGKNVEIWDSMQWIVAGTEGGAASK
Physico‐chemical
properties
protein length:376 AA
molecular weight: 40251,81130 Da
isoelectric point:9,27154
aromaticity:0,08245
hydropathy:-0,11968

Domains

Domains [InterPro]
G3DSA:2.60.520.10
STR
1–140
G3DSA:2.60.520.10 DC_2271
IPR048780
RBD
2–138
IPR048780
SSF141658
STR
2–138
SSF141658
IPR048780
RBD
2–139
IPR048780
ALM64135.1
1 376
Architecture
STR
STR 1-376
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
ALM64135.1
1 376
Domain Start End Length (AA) Confidence
N-terminal 1 206 206 0,8037
Central domain 207 365 160 0,1560
C-terminal 366 376 10 0,9972
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-206
Central
207-365
C-terminal
366-376

Taxonomy

  Name Taxonomy ID Lineage
Phage Lactococcus phage 936 group phage Phi4.2
[NCBI] 		1636566 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Lactococcus lactis
[NCBI] 		1358 cellular organisms > Bacteria > Bacillati > Bacillota > Bacilli > Lactobacillales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
ALM64135.1 [NCBI]
Genbank nucleotide accession
KP793123 [NCBI]
CDS location
range 14984 -> 16114
strand +
CDS
ATGACGATAACAAAATATACGTTTTTTAGTCCAAATGGTAACGATTTTCCAGTAACAGCTAACGCTGACGCAAAACTTTACATGGCTCTTGGTAATTTAGATTATACAACTTTTAGCCGTGTTGATTGGTCAAATACTACACAAGCTGGGCTAACTAAAACATTTGTCAAAACGAGTTTTGTGGTCGCTGGTAGGTTTTTCCAAGCTGAAAATGAACTTGTACAACTACACCCGGCAGCAACTAATTTTATTCATGCCGTGATTGATTTAAGTACGCCTTTAAATCCTGTTAAATTCACATCAGAAACAACGGATAACTCCAATACGATTGATATTAATAATTCATCAGGTATTTATAAGCGATGTGTCGAAAAAATTGTTACAAATAGCGGTTCTATTATTAGTACGGAAAAAATAGCTCAAAACAGAATATTTGATATAGCTACAATTAAAAAAGCAGTCATAAATACCGCTAACGTTGTGAATTCAAATGTTTCTGGGACAACTAACTTAAATACTTTAAATACTTCTGGAAAAGCTGTTTTAAGTATCTTAGAGGTAAAGAACTCTACGTTATTAAAAAATACTACAATTAGTGGTAATTTAACCGTTAGTGGTGTAACAACATCAAAATATTTCACAGCTACGGAATCAGTAACATCAAAAAACGTAACATCAAAAAACGTAACATCAAATAACGTAATAGCTGAAAACGCAATAACATCAAAAAACGTAATAGCTGAAAATACATTGATAGTAAAAGCTGTGAAGGGGAAACGTTCAGAACAATTTCAAACACCGACTACTTACGCTACAATCACAGGCACAGCTTTAAAGTTTTTCACTTTATACAAGTCCGCTAACGTGGTAACTTGTAACTTTGGGGGTACCCCTACAAGTGGTTCGATTCCAGGAGGTGGTGCTATTGTTGGTTGGATTACAGACAATGCGTTTAAACCAGAACACACTCAAAACTTTACCGTATTTGCAGCAAACGGTCAACGCTGTCGTTTTACAGTAGACCCAGGGGGGGCTGTTCGTTCACATGAACCAGTTGGAAAGAATGTTGAAATTTGGGATAGCATGCAATGGATTGTTGCGGGAACAGAGGGAGGAGCTGCTAGCAAGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
2f3b97b240c8f2987e9ea08ef7bbcb0160567ff1063a415d129138e65e94a753
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6909
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50