Protein

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Genbank accession
GENB_7e1c80ae3023 [GenBank]
Protein name
tail spike protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
TSP
Evidence RBPdetect2
Probability 0,94
Protein sequence
MANKPTQPLFPLGLETSESSNIKGFNNSGTIEHSPGAVMTFPEDTEVTGLPSSVRYNPDSDEFEGYYENGGWLSLGGGGIRWETLPHAPSSNLLEGRGYLINNTTGTSTVVLPSPTRIGDSVTICDAYGKFATYPLTVSPSGNNLYGSTEDMAITTDNVSATFTWSGPEQGWVITSGVGLGQGRVYSREIFTQILASETSAVTLNTPPTIVDVYADGKRLAESKYSLDGNVITFSPSLPASTELQVIEYTPIQLGNGGGSGSSTITWVYNGGSAIGGETEITLDIVVDDVPAIDINGSRQYKNLGFTFDPLTSKITLAQELDAEDEVVVIINGTPNIYNQIDYTLREVARVTNVKDTEVVYFSVGAVLSGYKVIYDKVTQRSYFIPELPTGTTAVSLSSSAVLVHSAGSVDLGALAVSREEYVTLSGTFDSGAVINVKNELLTHTDGKYRWDGALPKIVDAGSTPTTTGGVGLGAWVGVGDASLRSELNSTNGAGIVTTTSGYTVQETFDFIKNVQQANLHPFVPSGDFGFGLPFDSSLQVFKYNDEYYSYKGPIAPGSIVPANPSSDSNWKKEPVSDYIENYGGGVHVADQTPAILKAIAAGVRHIIFPKGELRMSQCDIPEYTQGLTFEGQGANQAYTGTTVIKPLSDNQNCLFNSGVNKHGQDSIKFKNIQFDGEWRCNHAILHESGAGWYYEKLTGKNFNTWVIYDDQGLTVMRDVYTEATSSDLTKRATGGCIRIYSDSVMDTVNCYGGSVPLWLAAGGNRITNIWANGGYDVGAIRLMPKNDSTNHINTAMSNIYIGESTNTSSTAIPVLDIRGNSIRRVSGVQISNAHFVHADLTLNTNVVMIRTDKVDGFVMSSFDVLGRGEYSSASSRTYNFLNATDSTGMAFSAGSVRGINNNPIVLSSGSRLAIDAVEFDGWSTNSDSGIENKAAIRSSGAGTRCCIGSSCAFNASQADAYAVYAGDEFAVDISILNLNYPSSNIIIPANTNYSYMYKRPGGKLTLVNTLTI
Physico‐chemical
properties
protein length:1013 AA
molecular weight: 108362,04580 Da
isoelectric point:4,74614
aromaticity:0,09279
hydropathy:-0,17098

Domains

Domains [InterPro]
DC_1946
ATT
1–687
DC_1946
G3DSA:3.30.2020.50
ATT
335–420
G3DSA:3.30.2020.50 G3DSA:2.10.10.80
IPR040775
RBD
416–481
IPR040775
GENB_7e1c80ae3023
1 1013
Architecture
ATT
ATT 1-687 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
GENB_7e1c80ae3023
1 1013
Domain Start End Length (AA) Confidence
N-terminal 1 593 593 0,9960
Central domain 594 991 399 0,9893
C-terminal 992 1013 21 0,7207
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-593
Central
594-991
C-terminal
992-1013

Taxonomy

  Name Taxonomy ID Lineage
Phage Salmonella phage SeTs-2
[NCBI] 		2698913 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
MN871504.1_CDS_[complement(47997..51038)] [NCBI]
Genbank nucleotide accession
MN871504.1 [NCBI]
CDS location
range 47997 -> 51038
strand -
CDS

  




        

        
      
    
  






  

  
  

    
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Tertiary structure


  



  

    

      
        
          
            
              

                

                  

                    

                      
PDB ID

                      
eed85258ec82975be6dcbb5767ad957e3a7e3603226215c64508db7e34acaee4

                    

                    
                      ESMFold
                    
                  

                  

                  

                    

                      Source
                      ESMFold
                    

                    

                      Method
                      ESMFold
                    

                    

                      Resolution
                      0,7198
                    

                    

                      Oligomeric State
                      monomer
                    

                    
                  

                  

                    
                      Download PDB
                    
                  

                  
                  
                  
                

                
                
                

                  

                    
                      
Model Confidence

                      

                        

                          

                          Very high
pLDDT > 90
                        

                        

                          

                          High
90 > pLDDT > 70
                        

                        

                          

                          Low
70 > pLDDT > 50
                        

                        

                          

                          Very low
pLDDT < 50