Protein

View in Explore
Genbank accession
XEM82282.1 [GenBank]
Protein name
tail spike protein
RBP type
TF
Evidence GenBank
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
TSP
Evidence RBPdetect2
Probability 0,95
Protein sequence
MLVWEQLGEGSVLNQPHMQTKTTPYTVYRFDDDGNWVTNPSTVLASVSQRMDKGYKPNINDLDIWDSLPENIKNQTAGATLRVMSGSNIIVNSPEATFGGYLFTLCNRILVKNPRNFIAWESGVTFENHHTSAWGYGNWVIGGEIKYGSGSAVLFIRNDGGDDHDGGVRDLISYRVGESGVKTYQNEIGGRSARNYRLVFDNITTIQCYYDGIDVNADTGSPVERVDDYPLSQYPWFQLPTKHIIRNIITKDCMGIGAWWDGQRNIIDNIVTYEAHKEGIFDRGTNNDITNVTVIGANKDLTNLNQLTCEGGSRLRGVLIHAYTTQGYAVYAPQSEISSVACAGSGTKKILCTYIGDVQGGNINVQHSENKMTLAMRPAMGGTINPSLVMTADCQVALPGGEASIVKLSAIQDGVRVGELQLNRLGFKHMSIPVAPSQLPESALEHNSSIGFFFGSDGVLRILAKKPDGTHVTYTLS
Physico‐chemical
properties
protein length:477 AA
molecular weight: 52246,12310 Da
isoelectric point:5,68051
aromaticity:0,08595
hydropathy:-0,26960

Domains

Domains [InterPro]
IPR012332
STR
1–476
IPR012332
IPR011050
STR
2–476
IPR011050
IPR015331
RBD
2–476
IPR015331
XEM82282.1
1 477
Architecture
STR
STR 1-476 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
XEM82282.1
1 477
Domain Start End Length (AA) Confidence
N-terminal 1 20 20 0,8948
Central domain 21 360 341 0,9759
C-terminal 361 477 116 0,8973
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-20
Central
21-360
C-terminal
361-477

Taxonomy

  Name Taxonomy ID Lineage
Phage Salmonella phage Ijeoma
[NCBI] 		3241051 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XEM82282.1 [NCBI]
Genbank nucleotide accession
PQ139366.1 [NCBI]
CDS location
range 40312 -> 41745
strand -
CDS
ATGTTGGTCTGGGAGCAACTCGGTGAAGGGTCTGTTTTGAACCAGCCGCATATGCAGACAAAAACAACGCCGTATACTGTGTATAGGTTCGATGACGACGGTAACTGGGTGACCAATCCGTCAACAGTGCTGGCGTCGGTATCTCAAAGGATGGACAAAGGGTATAAGCCTAACATTAATGATTTGGATATCTGGGACAGCTTACCCGAGAACATAAAAAATCAAACAGCCGGAGCAACACTCCGCGTTATGAGCGGGTCAAACATAATCGTAAATTCCCCAGAAGCGACTTTCGGTGGCTATTTATTCACCCTATGTAATCGTATACTGGTTAAAAACCCACGAAATTTTATTGCATGGGAATCAGGTGTTACTTTCGAGAACCACCATACTTCCGCATGGGGTTATGGTAACTGGGTTATCGGGGGGGAGATAAAATACGGTTCAGGGTCTGCTGTTTTGTTTATCCGCAACGACGGCGGTGATGACCATGATGGCGGGGTAAGAGACCTTATATCTTATCGTGTTGGGGAAAGCGGGGTAAAAACTTACCAGAACGAAATAGGCGGTAGGTCCGCCCGTAACTACCGCTTGGTATTCGATAATATTACGACTATACAGTGCTATTACGACGGGATAGATGTTAACGCAGATACCGGTTCCCCGGTTGAGCGCGTAGATGATTACCCACTTTCCCAATACCCGTGGTTTCAGTTGCCGACTAAACACATAATTCGCAACATAATCACGAAGGATTGCATGGGAATTGGTGCATGGTGGGATGGTCAACGGAACATTATTGATAATATTGTTACTTACGAGGCCCACAAAGAGGGTATTTTTGATAGAGGTACTAACAACGATATCACTAACGTAACGGTTATAGGTGCTAACAAGGATTTAACTAACCTGAATCAGCTTACCTGCGAAGGTGGTAGCCGGTTGCGGGGTGTGTTGATTCATGCATATACCACACAAGGATACGCCGTGTATGCCCCGCAATCTGAAATATCTTCGGTTGCGTGCGCTGGTTCAGGTACGAAAAAGATACTTTGTACCTATATTGGTGATGTACAGGGGGGCAACATTAATGTCCAGCATAGCGAAAATAAGATGACCCTTGCTATGCGTCCTGCGATGGGCGGTACTATAAACCCATCGCTAGTAATGACCGCAGATTGCCAAGTGGCCTTACCTGGTGGTGAAGCTAGTATTGTTAAGCTTTCAGCAATACAGGACGGCGTGCGAGTAGGCGAACTTCAGCTTAACCGATTAGGTTTTAAACATATGAGCATACCAGTAGCCCCATCGCAATTACCAGAAAGTGCATTGGAACATAACTCATCCATAGGTTTCTTCTTCGGCAGTGATGGGGTGTTGCGAATCCTTGCCAAGAAGCCAGACGGGACTCACGTAACCTACACCTTATCCTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
3d2c63cac200f78474409b34b230e33887683a47df6e193495fbf9fa4e3f523c
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6576
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Exploring Lytic Salmonella Phages as Potential Alternatives to Antibiotics: Isolation, Characterization, and Stability Assessment of Jerseyvirus Ijeoma and Apdecimavirus Ayanbimpe Olorundare,O.O., Nnadi,N.E., Nimzing,L. and Ayanbimpe,G.M. 2025-08-21 — GenBank