Protein

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Genbank accession
XWX32120.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TF
Evidence RBPdetect
Probability 0,87
Protein sequence
MVNSMFGGDLDPYEKSLNYEYPYHPSGNPKHIDVSEIDNLTLADYGWSPDAVKAYMFGITVQNPDTGQPMGDEFYNHILERAVGKAERALDISILPDTQHEMRDYHETEFNSYMFVHAYRKPILQVENLQLQFNGRPIYKYPANWWKVEHLAGHVQLFPTALMQTGQSMSYDAVFNGYPQLAGVYPPSGATFAPQMIQLEYVSGMLPRKKAGRNKPWEMPPELEQLVIKYALKEIYQVWGNLIIGAGIANKTLEVDGITETIGTTQSAMYGGASAQILQINEDIKELLDGLRAYFGYNMIGL
Physico‐chemical
properties
protein length:302 AA
molecular weight: 34134,35100 Da
isoelectric point:5,01396
aromaticity:0,11921
hydropathy:-0,34371

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Staphylococcus phage PG-2021_29
[NCBI] 		2815622 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Staphylococcus epidermidis
[NCBI] 		1282 cellular organisms > Bacteria > Bacillati > Bacillota > Bacilli > Bacillales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XWX32120.1 [NCBI]
Genbank nucleotide accession
MZ417327.1 [NCBI]
CDS location
range 56335 -> 57243
strand -
CDS
ATGGTTAACTCAATGTTCGGAGGGGACTTAGACCCTTATGAGAAATCATTAAACTATGAATATCCTTATCACCCATCAGGTAACCCTAAACATATAGATGTAAGTGAGATAGATAACTTAACATTAGCTGATTATGGGTGGTCACCGGATGCAGTTAAAGCTTATATGTTCGGTATCACAGTACAAAATCCTGATACAGGACAACCTATGGGTGATGAGTTTTATAATCACATATTGGAAAGAGCAGTAGGTAAAGCCGAGAGAGCTTTAGATATATCTATATTACCTGACACACAACATGAGATGAGAGATTATCATGAGACAGAATTTAATAGTTATATGTTTGTACATGCGTACAGAAAACCTATTTTACAAGTAGAAAACCTGCAACTACAGTTTAATGGGAGACCTATATATAAATACCCTGCTAACTGGTGGAAAGTAGAGCACCTAGCAGGACATGTACAGTTATTCCCAACAGCACTAATGCAAACAGGACAATCAATGTCATATGATGCTGTATTTAATGGGTACCCGCAATTAGCAGGTGTATACCCACCATCAGGAGCAACATTTGCACCTCAGATGATACAGTTAGAATATGTATCCGGAATGTTGCCACGTAAAAAAGCAGGAAGAAACAAGCCATGGGAAATGCCTCCTGAATTAGAACAGCTAGTTATAAAATATGCATTGAAAGAAATATACCAAGTATGGGGTAACTTAATCATTGGTGCCGGTATTGCTAATAAAACATTAGAAGTAGACGGTATTACAGAAACAATAGGAACTACTCAATCAGCTATGTATGGTGGAGCTAGTGCTCAGATACTTCAAATAAATGAAGATATAAAAGAATTATTGGATGGTTTAAGAGCTTACTTTGGATATAATATGATAGGATTATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
8a9a0d475ad23203ef4075562794ed8216ab987f451462ac98c343ed645e5959
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,7637
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Natural phage communities crosslink different species within the genus Staphylococcus Goller,P.C., Elsener,T., Lorge,D., Radulovic,N., Bernardi,V., Naumann,A., Amri,N., Khatchatourova,E., Hernandes Coutinho,F., Loessner,M.J. and Gomez-Sanz,E. 2024 — GenBank