Protein

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Genbank accession
ATW57867.1 [GenBank]
Protein name
pentapeptide repeat protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MQTKKPVVIDHDEFLSVLMTGDRDTLKGNVIFGVKVEGLDLTELDLSNCVLIDTSFTRCNLHKANFNGVHTGSTGVSFIGCEIQGAKFNDADLSAVSLLGCTILGTEFMHADFSRSKVVGSRLLSCNLRGTNFVGADLDGTVFQNNDLYNAIGNGAQLKSIMCAPWPITYTATELQFASHRTDAARPDMIRTDSVKVSHGIGAAQTWEKWKALILSVMKHEPAVKSPNVPFLPHSYKGTEIAELLSELKVSGEHGSVYVESVEDESE
Physico‐chemical
properties
protein length:267 AA
molecular weight: 29010,56320 Da
isoelectric point:5,35755
aromaticity:0,07116
hydropathy:-0,07566

Domains

Domains [InterPro]
G3DSA:2.160.20.80
STR
22–177
G3DSA:2.160.20.80
SSF141571
STR
33–160
SSF141571
IPR051082
Unmapped
33–161
IPR051082
IPR001646
STR
40–69
IPR001646 IPR001646
ATW57867.1
1 267
Architecture
STR
STR 22-177 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
ATW57867.1
1 267
Domain Start End Length (AA) Confidence
N-terminal 1 48 48 0,2214
Central domain 49 247 200 0,4754
C-terminal 248 267 19 0,9801
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-48
Central
49-247
C-terminal
248-267

Taxonomy

  Name Taxonomy ID Lineage
Phage Pseudomonas phage tabernarius
[NCBI] 		2048978 Uroviricota > Caudoviricetes > Lindbergviridae > Tabernariusvirus tabernarius >
Host Pseudomonas syringae pv. avii
[NCBI] 		663959 Pseudomonadota > Gammaproteobacteria > Pseudomonadales > Pseudomonadaceae > Pseudomonas > Pseudomonas syringae

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
ATW57867.1 [NCBI]
Genbank nucleotide accession
MG018926 [NCBI]
CDS location
range 9107 -> 9910
strand -
CDS
ATGCAAACCAAAAAGCCGGTCGTTATCGACCACGACGAATTTTTATCGGTCTTGATGACCGGCGACCGTGACACACTGAAAGGGAATGTCATTTTCGGCGTGAAAGTGGAAGGTCTGGATTTGACCGAACTGGACTTGTCGAACTGCGTACTTATCGACACATCCTTTACGCGCTGCAATCTGCACAAGGCGAACTTTAACGGGGTTCACACCGGTAGTACCGGCGTATCTTTCATCGGCTGCGAAATCCAAGGCGCCAAGTTCAACGATGCGGACTTGTCCGCCGTATCCCTGTTGGGCTGCACCATCCTTGGAACGGAGTTCATGCACGCGGACTTTTCGCGTTCCAAGGTCGTTGGCTCCCGCCTTCTTAGCTGCAACCTTCGCGGAACCAACTTTGTAGGCGCAGACCTTGACGGTACGGTGTTTCAGAACAACGACCTGTACAACGCCATAGGCAACGGCGCGCAACTCAAGTCGATCATGTGCGCGCCTTGGCCCATCACCTACACGGCGACGGAATTGCAATTCGCTTCCCACCGTACCGACGCAGCGCGCCCGGACATGATTCGGACTGATAGCGTCAAAGTGTCGCACGGTATCGGTGCCGCGCAGACGTGGGAGAAGTGGAAGGCGCTTATTCTTTCGGTGATGAAACATGAACCGGCGGTCAAGTCTCCGAACGTCCCTTTCCTGCCACATTCGTACAAGGGAACGGAAATCGCGGAATTGCTTTCTGAATTGAAAGTGTCCGGCGAACATGGTTCGGTTTACGTCGAATCCGTCGAAGACGAATCGGAATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
9e263d9f0ddddd9fd67b4773af3683ba035850623179e9898e6edf745c80882c
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6737
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50