Protein

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Genbank accession
QRV71449.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TF
Evidence RBPdetect
Probability 0,78
TSP
Evidence RBPdetect2
Probability 0,90
Protein sequence
MATIINADTSDGLKLTSDTSGQLELQSAGSTKVTMDTTGNVGIGTTSPAQQLHLSGTGAIKQRYTRNANSTDISLASNGMFNTDNLAATGFGWYNNGSERMRIDSSGTLFLGQTSNPATGSMVIKVPTTVGNGINFQSTGTATSYAIGIYNNTGGNVGSISFTTTSTAYNTSSDYRLKENVAPMSGSIDRLKQLKPSTWLWTQDGSHGEGFLAHEAQEVVPESVHGNKDAMRTEEYEVTPAVLDDDGNVVTEAVMGTREVPDYQGIDQSKLVPLLTAALQEAIQRIEALEAK
Physico‐chemical
properties
protein length:292 AA
molecular weight: 30918,71030 Da
isoelectric point:4,71340
aromaticity:0,05822
hydropathy:-0,37500

Domains

Domains [InterPro]
DC_1367
RBD
55–292
DC_1367
IPR030392
CHP
173–292
IPR030392
IPR030392
CHP
173–224
IPR030392 Coil
QRV71449.1
1 292
Architecture
RBD
RBD 55-292
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
QRV71449.1
1 292
Domain Start End Length (AA) Confidence
N-terminal 1 10 10 0,0026
Central domain 11 209 200 0,0539
C-terminal 210 292 82 0,9982
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-10
Central
11-209
C-terminal
210-292

Taxonomy

  Name Taxonomy ID Lineage
Phage Methylophilales phage MEP301
[NCBI] 		2806696 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Methylophilales bacterium
[NCBI] 		2546201 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Betaproteobacteria > Nitrosomonadales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QRV71449.1 [NCBI]
Genbank nucleotide accession
MW452941.1 [NCBI]
CDS location
range 11347 -> 12225
strand -
CDS
ATGGCTACAATAATTAATGCAGATACAAGTGACGGACTAAAGCTAACCTCTGATACATCAGGGCAACTAGAATTACAGTCAGCAGGCTCAACTAAAGTTACAATGGATACTACTGGTAATGTAGGTATTGGTACTACGAGTCCTGCTCAACAGTTACATCTTTCTGGTACTGGCGCAATAAAACAACGCTACACAAGAAACGCTAATTCTACAGATATTTCGCTTGCCTCAAACGGCATGTTTAATACTGATAACTTAGCGGCTACAGGCTTTGGTTGGTACAACAACGGCTCAGAGCGTATGCGTATTGACTCTAGTGGAACTTTATTCCTAGGGCAAACATCAAACCCAGCAACAGGTTCTATGGTTATTAAAGTACCAACAACTGTAGGCAATGGTATTAATTTTCAATCAACAGGAACTGCTACATCTTATGCAATTGGTATCTATAATAATACTGGTGGTAATGTTGGTTCTATTTCTTTTACCACAACATCAACAGCGTACAATACCTCATCAGACTACCGCCTAAAAGAAAATGTAGCACCTATGTCTGGCAGTATAGACAGACTTAAACAACTCAAACCTAGCACATGGTTATGGACACAAGATGGCTCTCATGGTGAAGGATTCCTAGCACACGAAGCACAAGAGGTTGTACCAGAATCAGTACACGGAAATAAAGATGCTATGCGTACAGAAGAGTATGAAGTGACTCCAGCAGTATTAGATGATGATGGTAATGTAGTTACTGAAGCAGTTATGGGAACTAGAGAAGTCCCTGACTATCAAGGCATAGACCAATCTAAACTTGTACCATTACTAACCGCAGCACTACAAGAAGCAATACAACGAATAGAAGCATTGGAGGCTAAATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
2e68ecfe25819373ba87938ddab42005b87bc14f03147d5ea7d980227bcbe184
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7889
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Genomic characterization and distribution pattern of a novel marine OM43 phage Zhao,Y. — — GenBank