Protein

View in Explore
Genbank accession
WVH05524.1 [GenBank]
Protein name
tail spike protein
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
TSP
Evidence RBPdetect2
Probability 0,95
Protein sequence
MATRIAQVFGNAGDLTTVPDQSVGTELSFEQGWSPAYSLPAGAPGYRYIDRAQHNYLWNAVTGNVKQWQEQAYPQWFSNIDYPIGAKVRRNDLNYEKNANNDGVGSEPGSSADWIVINELSAKNELLNGSLFSGSNGRYIQNGDVIPEETTHIYVLISGKPTILIAWDSLTLPATVTTVPSSDNGLAGYNVITEQGTFEFVTESIYNLRGFEFAGRKIASPQGWGAVLDGVNPDDAAYNAMIADGGADVYAQFSGNALFTNPVSFGDDKRWFIDKDAKVTKDPSLMNDSFIILGDDCVIDGFGTIDGNYHNMDKPNNTETIGNAVRVGARCLVQDVTMINTESSHIASSGLNTTDWGSGLRVKNVAFGDFVEHCVYCSGKCDDIDVQARYVKATNTSDNPREAFKVRGEIGNVTWRDCPYVDIPGTRGNLFSIEVDAVTANNKFDGTVTIRNFPYVNCLYNGQCFCTDTTTELGTVIEDNVNFIGVATQLSELREPVRSGSNLYGFKRLILRNSKFHNVLPQSFYQKDSFSAEPNYHLTIGNNEWSTDYPLLVADIPVSSLGGVTVKYEYFENTVTPDFTTRFTPGHNVSVLHIKENVLSRISELVYPVRSVETITIESNRDLIEANRAPLDVSGIAGLYTIDEATFDDNVFRHSNTASGLTIGVLAGTVTNLNNDPNGNTILYTGVNLRVIGTTAERPSSALVGFRYFDTTLGKPVWFVGGGVWNDATGSPS
Physico‐chemical
properties
protein length:733 AA
molecular weight: 80120,88630 Da
isoelectric point:4,67662
aromaticity:0,10368
hydropathy:-0,25757

Domains

Domains [InterPro]
DC_0660
STR
15–733
DC_0660
IPR011004
STR
252–335
IPR011004
WVH05524.1
1 733
Architecture
STR
STR 15-733
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
WVH05524.1
1 733
Domain Start End Length (AA) Confidence
N-terminal 1 234 234 0,9869
Central domain 235 676 443 0,9838
C-terminal 677 733 56 0,9488
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-234
Central
235-676
C-terminal
677-733

Taxonomy

  Name Taxonomy ID Lineage
Phage Vibrio phage vB_VpaS_PGA
[NCBI] 		3111807 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
WVH05524.1 [NCBI]
Genbank nucleotide accession
PP001175.1 [NCBI]
CDS location
range 27908 -> 30109
strand +
CDS
ATGGCAACAAGAATAGCACAGGTATTTGGTAATGCTGGGGATTTAACAACAGTTCCTGATCAATCGGTAGGGACTGAGTTGTCCTTTGAGCAAGGATGGTCTCCGGCATATTCCTTGCCGGCTGGAGCGCCTGGTTATCGATACATAGACCGAGCTCAACATAACTATTTGTGGAACGCTGTTACTGGTAATGTCAAACAATGGCAGGAGCAAGCTTATCCTCAATGGTTCAGTAATATTGATTATCCTATTGGTGCAAAGGTTAGGCGCAATGATCTAAATTATGAAAAAAATGCCAATAATGATGGTGTAGGCTCAGAGCCTGGAAGTAGTGCAGATTGGATTGTTATTAATGAATTATCAGCTAAAAATGAACTTTTAAATGGTAGTTTATTTTCTGGCTCTAATGGTAGATATATTCAGAACGGAGACGTAATACCAGAAGAAACCACGCACATTTATGTACTCATTAGTGGTAAACCTACGATTTTAATTGCGTGGGATTCTTTGACTTTGCCAGCAACCGTCACAACTGTTCCATCATCAGATAATGGATTAGCTGGTTATAACGTGATAACTGAACAAGGGACTTTTGAGTTTGTAACGGAATCTATCTATAACCTTCGCGGGTTTGAGTTTGCCGGAAGAAAAATAGCATCACCTCAAGGTTGGGGGGCTGTACTAGATGGAGTAAATCCAGATGATGCGGCATATAACGCCATGATAGCTGATGGCGGAGCAGATGTTTACGCGCAGTTTTCAGGAAATGCATTATTTACCAACCCTGTATCATTTGGTGATGATAAAAGGTGGTTTATTGATAAGGATGCAAAAGTAACAAAAGACCCTAGCCTGATGAATGACTCTTTTATTATTCTTGGTGATGATTGTGTTATTGATGGTTTTGGCACTATCGATGGAAACTACCACAACATGGACAAGCCGAACAACACAGAAACGATCGGTAACGCTGTCCGTGTTGGCGCTCGATGTTTGGTACAAGATGTAACCATGATTAATACTGAGTCAAGTCATATTGCATCGTCTGGGCTTAACACGACTGATTGGGGATCTGGGTTAAGGGTTAAGAATGTTGCCTTTGGAGATTTTGTTGAACATTGCGTTTACTGCTCTGGTAAGTGTGATGACATTGACGTACAAGCGAGATATGTAAAAGCAACAAATACAAGTGATAACCCCCGCGAAGCGTTTAAGGTTCGCGGAGAAATAGGTAATGTTACATGGCGTGATTGTCCTTATGTTGACATACCTGGTACAAGAGGTAATTTATTCTCAATTGAAGTTGATGCGGTAACCGCAAATAACAAGTTTGATGGAACTGTAACTATTAGAAACTTTCCATATGTTAACTGTCTATACAATGGTCAATGTTTTTGTACAGATACAACAACAGAGCTTGGGACTGTAATTGAAGATAATGTAAACTTCATTGGTGTTGCAACTCAATTGTCAGAACTAAGAGAGCCAGTAAGATCTGGTAGTAATTTATATGGTTTCAAGCGCTTAATACTTAGGAATAGCAAGTTCCATAATGTTTTGCCGCAAAGTTTCTATCAGAAAGATTCGTTCTCAGCTGAGCCAAACTACCACCTAACAATAGGTAATAACGAGTGGTCAACTGATTACCCTCTACTTGTTGCAGACATTCCTGTGTCGTCTCTAGGTGGTGTGACTGTAAAATATGAATACTTTGAAAATACAGTAACTCCAGATTTTACTACTAGATTTACTCCTGGTCATAATGTATCAGTGCTGCACATCAAAGAAAATGTTTTGTCTAGGATTTCTGAACTTGTTTATCCTGTTAGATCTGTTGAAACCATAACAATAGAAAGTAATAGAGATTTAATTGAAGCTAACCGAGCTCCATTGGATGTGAGCGGAATAGCTGGACTTTACACAATAGACGAAGCGACATTTGATGATAATGTATTTAGGCATTCAAATACTGCTTCAGGGCTTACTATTGGTGTTTTAGCTGGTACTGTAACAAACCTAAATAACGATCCTAATGGAAACACGATACTCTATACCGGCGTAAATCTTCGCGTCATTGGCACAACGGCGGAAAGACCTTCGAGCGCTCTAGTTGGCTTTAGATACTTTGATACAACGCTAGGTAAACCAGTGTGGTTTGTCGGTGGTGGCGTCTGGAATGATGCGACTGGCAGCCCATCATGA

Genome Context

Genome Context

Tertiary structure

PDB ID
ec4b517116419c8ed6b4cd4f26303e8cbf5d6b768d56c7fe67560b8174e5997d
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6640
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50