Protein

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Genbank accession
WNM53347.1 [GenBank]
Protein name
pre-neck appendage protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,89
TSP
Evidence RBPdetect2
Probability 0,94
Protein sequence
MTEGTYIISGIKMPNYTILSGEGKGITYLRIADDAPAETIGITNLNMDGTAEYIGVDNFTIDGNRTRQGNTLSPAGGSRSSNIRFAGVKHGFACSVESFSSLLHGIDVTYASDDYFYQGDGIRVNEALESKYIHIQECETYDFGDDGITTHHSRYLILQNNYSHDPVKDSGNHNGIEVDDGSQHVFVMGNKTEKCFGGLEIKAHEPTSAASDVVVSDHIDIKSIRSYNIRHIGHHRAGDVQSKTAYNIMLNNCTSLYPQYNGSYENTTPRAMVICAYRNVVVNNFTAIGDGNFMANMPVIAVQFRAENVMLNNINVSGFKNSLADVKVFGGANRPKKVSLSNINIVNSSNNRGIAGGGKIYDLRIINANLQGNGTGNGVELYNNTAEIVGVSAENYKRPAMIAGKEYFYMPTSLKGGFSGGSTGSAAIAERSAVIASTDGSFAHSNRSFVIGSGAGSIANGSRSGVISSLSSVIEPGGHTRMIINSKNMKNSENYHIKAGYGADGPPSESNTKLDISTFTGTIKTAGQVQSGQNFGDYAEYFESQSGMAIPTGNIVTLDGRFIRKAQVNDIPIGVISETAGVILGDQMFHHKDKYLKNEFGGVITESVKKEWQDDAGNWYSDTVEMPVKNPDFDERDEEEYLSRAERPEWNVVGLIGQVYIRIDGTVKENDYIKPVNGVGTKDNINGYYRVEQITTPYDNDKGYGVAIAFIHPITPSIINKGSVK
Physico‐chemical
properties
protein length:725 AA
molecular weight: 78616,47060 Da
isoelectric point:5,66130
aromaticity:0,08690
hydropathy:-0,38041

Domains

Domains [InterPro]
DC_0927
STR
1–244
DC_0927 G3DSA:2.160.10.20 G3DSA:2.40.300.10
IPR012334
STR
2–412
IPR012334 IPR021865
IPR011050
STR
3–331
IPR011050 G3DSA:4.10.80.40
DC_0616
STR
205–481
DC_0616
WNM53347.1
1 725
Architecture
STR
RBD
STR 1-481 | RBD 482-711 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
WNM53347.1
1 725
Domain Start End Length (AA) Confidence
N-terminal 1 10 10 0,2993
Central domain 11 492 483 0,9902
C-terminal 493 725 232 0,8977
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-10
Central
11-492
C-terminal
493-725

Taxonomy

  Name Taxonomy ID Lineage
Phage Staphylococcus phage S-CoN_Ph12
[NCBI] 		3076568 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Staphylococcus sp.
[NCBI] 		29387 cellular organisms > Bacteria > Bacillati > Bacillota > Bacilli > Bacillales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
WNM53347.1 [NCBI]
Genbank nucleotide accession
OR354835 [NCBI]
CDS location
range 32500 -> 34677
strand +
CDS
ATGACAGAAGGTACTTATATTATATCTGGTATTAAAATGCCTAACTACACTATTTTAAGTGGAGAAGGTAAAGGGATAACATATTTAAGAATTGCTGATGATGCTCCAGCTGAAACAATTGGTATAACTAACTTAAATATGGATGGAACAGCTGAATATATCGGTGTTGATAATTTCACAATTGATGGAAATAGAACAAGACAAGGAAACACGTTATCTCCAGCTGGTGGTTCACGTTCAAGTAATATTAGATTTGCTGGTGTTAAGCATGGTTTTGCATGTTCTGTAGAATCATTTAGTAGTTTATTACATGGTATTGATGTAACGTACGCTAGTGATGATTATTTCTATCAAGGAGACGGAATCAGAGTAAATGAAGCATTAGAAAGTAAATACATTCATATACAAGAATGTGAAACTTATGATTTCGGAGATGATGGTATCACTACTCATCATAGTAGATACTTAATTCTACAAAATAATTATTCACATGACCCAGTAAAAGATAGTGGGAACCATAACGGTATTGAAGTAGACGATGGTTCACAACATGTATTTGTTATGGGTAACAAAACAGAAAAATGTTTTGGTGGTTTAGAAATCAAAGCACACGAACCTACAAGCGCAGCAAGCGATGTTGTTGTAAGTGACCATATTGATATTAAAAGTATTCGTTCTTATAATATTCGTCATATCGGACATCATAGAGCTGGGGATGTACAATCTAAAACAGCTTATAATATTATGTTGAATAACTGTACTTCATTATATCCACAATATAATGGTTCATATGAGAACACAACACCAAGAGCAATGGTTATTTGTGCTTACAGAAATGTAGTCGTTAATAACTTTACAGCTATTGGCGATGGCAACTTTATGGCAAATATGCCAGTTATTGCTGTTCAATTCAGAGCTGAAAATGTTATGCTTAATAATATTAATGTAAGTGGTTTCAAAAATTCATTAGCTGATGTTAAAGTATTTGGTGGAGCAAATAGACCTAAAAAAGTATCATTATCTAATATCAACATTGTTAATTCATCTAACAATAGAGGTATTGCAGGCGGTGGAAAAATTTATGATTTAAGAATTATAAATGCTAACTTGCAAGGTAATGGTACAGGAAATGGTGTTGAATTATATAACAACACGGCTGAAATTGTTGGAGTAAGTGCTGAGAATTATAAAAGACCAGCTATGATTGCTGGAAAAGAGTATTTTTATATGCCCACAAGTCTTAAAGGAGGATTTAGTGGAGGGAGTACAGGTAGTGCAGCTATTGCTGAAAGAAGTGCTGTTATTGCCTCTACTGATGGTTCCTTTGCTCATAGTAACCGTTCTTTTGTTATAGGCTCTGGTGCTGGTAGTATTGCTAATGGTTCACGTTCTGGTGTTATTAGTTCATTGTCATCTGTTATTGAGCCAGGCGGACATACTAGAATGATTATTAATAGTAAAAACATGAAAAACAGTGAAAACTATCACATTAAAGCTGGTTATGGAGCTGACGGTCCACCAAGTGAATCAAATACTAAACTTGATATTAGTACATTTACTGGTACAATCAAGACAGCAGGACAAGTTCAATCTGGACAAAACTTTGGGGACTATGCCGAGTATTTTGAATCACAAAGTGGTATGGCAATTCCTACTGGTAATATAGTTACACTTGATGGCAGATTTATAAGAAAAGCACAAGTCAATGATATTCCAATCGGTGTTATATCTGAGACAGCAGGAGTTATTTTAGGGGACCAAATGTTCCATCACAAAGATAAATATCTTAAAAATGAGTTTGGCGGAGTCATTACTGAAAGCGTCAAAAAAGAATGGCAAGATGATGCTGGTAATTGGTATTCAGATACAGTAGAAATGCCAGTTAAAAATCCAGATTTTGACGAACGAGACGAAGAAGAATATCTATCTCGTGCTGAACGACCAGAATGGAACGTTGTAGGTCTTATAGGTCAAGTATATATTAGAATAGATGGTACTGTCAAAGAAAATGATTATATTAAGCCAGTAAACGGTGTCGGAACTAAAGATAATATTAATGGTTATTATAGAGTTGAACAAATTACTACCCCATATGATAACGATAAAGGTTATGGTGTGGCAATTGCATTTATCCACCCTATTACACCAAGCATAATTAATAAAGGAAGTGTTAAATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
9c1db5b2de4b04ce42f0a23a85f1e300a66c4411e5feec4d8eb36d3f47b8ea20
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7939
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50