Protein

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Genbank accession
YP_007517792.1 [GenBank]
Protein name
tail protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect2
Probability 0,74
Protein sequence
MALVSRTIPNLVQGISQQPEVLRLSSQATTQENGFSSVVEGLKKRPPTNYLAKLSNTTPNNAYIHTINRDVSERYLIQITNGAIAVYTTAGVSKTVTMQTGAVDYLTSTDPKGDFVAMTVADYTFILNKKKVTAMASTTSTAKVEQAIYSVLQGVTDTKYSITIDGSTFSFTSSDTNTETIRDGLKSACGTIANITFANIGNSSFSIIKSSGTLTVSASDGYGDDASQVVGDTVQNFVDLPSPAIDNMVVKITGDATNGFDDYYVQYDSSGDVWQESVAPSMKTTLDNTTMPHVLIRTADGNFRFSQVDGSTYTISGTDYTVPAWGLRISGDDISAPDPSFIGRKINDIFFHKNRLGFLSDENVVMSRSGEYFAFFNETVTTVLATDVIDVASTHNKVSILRSAISFDEGILLFSDQTQFILAGANSTITPENVSINVSTEFEASSSVKPIGSGSNVFFAFDKGSFTGFREFYVKSDTDTKSADDITSNIPRYIPSGVFKLAIATNENIMLALSSNEQNAIYVHQYYVTGGKRLQSAWHKWIFGTSSTDKILNIDFIENTLYIVNQRSDGVYLETMDISPAVTDDSADYLTHLDRKISNSTSGVSESYNSGTNQTTITIPYTKTNTLSLVGASTGSNQAGQEISIVSQTGTSIVVAGDITSYDYFIGEDYTFKFVFSQQFIQEADAQGSRISIKEGRLQIRNWSVNYNNTGFFTTVVNPVGRSSSSTTFTGTITGTGLLGTVNLADGDYAFAVQSESDKLTVTLASDSHLPCNFINASWQGYYVTASSRV
Physico‐chemical
properties
protein length:790 AA
molecular weight: 85527,68510 Da
isoelectric point:4,71652
aromaticity:0,10000
hydropathy:-0,15203

Domains

Domains [InterPro]
IPR058003
TTP
1–790
IPR058003
YP_007517792.1
1 790
Architecture
TTP
TTP 1-790
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
YP_007517792.1
1 790
Domain Start End Length (AA) Confidence
N-terminal 1 176 176 0,8420
Central domain 177 375 200 0,1594
C-terminal 376 790 414 0,2888
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-176
Central
177-375
C-terminal
376-790

Taxonomy

  Name Taxonomy ID Lineage
Phage Pelagibacter phage HTVC011P
[NCBI] 		1283078 Uroviricota > Caudoviricetes > Autographivirales > Stopavirus HTVC011P >
Host Candidatus Pelagibacter ubique HTCC1062
[NCBI] 		335992 Bacteria > Proteobacteria > Alphaproteobacteria > Pelagibacterales > Pelagibacteraceae > Candidatus Pelagibacter

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_007517792.1 [NCBI]
Genbank nucleotide accession
NC_020482 [NCBI]
CDS location
range 21360 -> 23732
strand +
CDS
ATGGCATTAGTCTCTAGGACTATTCCTAATTTAGTGCAGGGTATCTCTCAGCAACCAGAAGTATTGAGATTATCTAGTCAAGCCACTACACAAGAAAATGGATTTAGTTCTGTTGTAGAAGGTTTAAAAAAGAGACCACCTACTAATTATTTAGCAAAATTAAGTAATACAACACCTAATAATGCTTACATACACACTATTAACAGAGATGTTTCTGAAAGATATTTAATACAAATTACAAATGGTGCAATAGCAGTTTATACAACAGCAGGTGTTTCTAAAACAGTTACAATGCAAACAGGTGCAGTTGATTACTTAACATCTACTGACCCTAAAGGTGACTTTGTTGCAATGACTGTTGCTGATTATACATTTATTTTAAACAAGAAAAAAGTAACAGCTATGGCTAGTACAACTAGTACAGCAAAAGTTGAACAAGCTATTTATTCAGTATTACAAGGAGTTACAGATACCAAGTATTCTATTACTATTGATGGTTCTACTTTCTCATTTACAAGTTCAGATACAAATACAGAAACAATTAGAGATGGCTTAAAGTCAGCTTGTGGAACTATTGCAAACATAACTTTTGCAAATATAGGTAATTCAAGTTTTTCAATAATTAAATCTAGTGGCACACTTACAGTTTCAGCTAGTGATGGTTATGGAGATGATGCTTCACAAGTAGTTGGAGATACAGTACAAAATTTCGTAGACCTTCCTTCACCTGCAATAGACAATATGGTTGTTAAAATTACTGGTGATGCAACAAATGGTTTTGATGATTATTACGTACAATATGATAGTAGTGGTGATGTTTGGCAGGAAAGTGTAGCACCAAGCATGAAGACAACTTTAGACAACACTACCATGCCACATGTTTTAATAAGAACAGCAGATGGCAATTTTAGATTTTCACAAGTAGATGGTTCTACTTACACAATATCAGGAACAGATTATACTGTACCTGCTTGGGGTTTAAGAATAAGTGGTGATGATATTTCTGCACCTGACCCTAGTTTTATTGGTAGAAAAATAAATGATATATTCTTTCATAAGAATAGATTAGGTTTTTTATCTGATGAAAATGTTGTTATGTCAAGGTCAGGAGAATACTTTGCGTTTTTTAATGAGACAGTAACTACTGTATTAGCAACTGATGTAATTGATGTAGCTTCAACACACAATAAAGTTTCTATACTTAGAAGTGCTATATCTTTTGATGAAGGAATACTTTTATTTTCAGACCAAACACAATTTATATTAGCAGGTGCAAATAGTACAATTACACCAGAAAATGTATCTATTAATGTATCAACAGAATTTGAAGCATCTTCTTCAGTTAAACCTATTGGTTCAGGTAGTAATGTATTCTTCGCCTTTGATAAAGGAAGTTTTACAGGCTTTAGAGAATTTTATGTAAAATCAGATACAGATACTAAAAGTGCTGATGATATTACAAGTAACATACCTAGATATATCCCTTCAGGAGTATTTAAACTAGCTATTGCAACTAATGAAAACATTATGTTGGCATTATCTTCTAATGAACAAAATGCAATATATGTTCATCAATATTATGTAACTGGTGGAAAAAGATTACAAAGTGCATGGCATAAATGGATTTTTGGTACATCTTCTACAGATAAAATATTAAATATAGATTTTATAGAAAACACTTTATATATAGTGAACCAGAGAAGTGATGGAGTTTATTTGGAAACAATGGACATATCACCTGCTGTAACTGATGATAGTGCAGATTATTTAACACATCTAGATAGAAAAATTTCAAATAGTACGTCAGGAGTGAGTGAAAGTTACAATTCTGGTACTAATCAAACAACAATAACAATACCTTATACTAAAACTAATACTTTAAGTCTTGTGGGTGCAAGTACAGGTTCAAATCAAGCAGGACAAGAAATTAGTATAGTATCTCAAACAGGCACATCAATAGTAGTTGCAGGAGATATTACATCTTATGATTATTTTATTGGTGAGGATTATACTTTTAAATTTGTATTCTCCCAACAATTTATACAAGAAGCTGATGCACAAGGTTCAAGAATATCTATTAAAGAAGGTAGATTACAAATAAGAAACTGGAGTGTTAATTATAACAACACTGGGTTTTTTACAACTGTGGTTAATCCAGTAGGAAGAAGCAGTTCATCAACAACATTTACAGGAACGATTACAGGAACAGGATTACTTGGTACTGTTAATTTAGCTGATGGCGATTACGCATTTGCTGTTCAATCTGAAAGTGACAAACTTACAGTAACACTAGCATCTGATAGCCATTTGCCTTGTAATTTTATCAACGCAAGTTGGCAAGGATATTATGTTACAGCAAGTTCAAGAGTTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
57a966fa25814e7b0f3dde780399b0e3c20c154b71b6a98d3510e58a3048bb9f
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,9289
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50