Protein

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Genbank accession
QFG06508.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TF
Evidence RBPdetect
Probability 0,89
TF
Evidence RBPdetect2
Probability 0,88
Protein sequence
MSILQTSGIQFGSDNTILNSKYGIIPQNSKAVFYQANAPTGWTKVTTHNNKALRVVSGTGGGYGSGGTAGPGGQPFSTIFPTSVRPISGTVTAAGTVNATTLTIQQIPGHTHNAGSQVNVSPGSPGIGGRAVNAQAPATSPTGGGGSHTHPFGGSASPYSGTIDMRVQYIDVIICNFT
Physico‐chemical
properties
protein length:178 AA
molecular weight: 17903,64210 Da
isoelectric point:9,72875
aromaticity:0,06742
hydropathy:-0,14775

Domains

Domains [InterPro]
DC_0147
STR
4–175
DC_0147
QFG06508.1
1 178
Architecture
STR
STR 4-175 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Synechococcus phage S-SCSM1
[NCBI] 		2588487 Uroviricota > Caudoviricetes > Pantevenvirales > Zhoulongquanvirus > Zhoulongquanvirus esscess
Host Synechococcus sp. WH 7803
[NCBI] 		32051 Bacteria > Cyanobacteria > Oscillatoriophycideae > Chroococcales > Synechococcus >

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QFG06508.1 [NCBI]
Genbank nucleotide accession
MK867354.2 [NCBI]
CDS location
range 213332 -> 213868
strand +
CDS
ATGTCTATTTTACAAACGAGTGGTATACAATTTGGTTCTGACAATACCATTCTAAACTCTAAGTATGGTATTATTCCTCAAAATAGTAAAGCAGTATTTTATCAAGCAAATGCTCCTACTGGATGGACAAAAGTAACTACACATAATAATAAAGCACTTAGAGTTGTATCTGGAACTGGTGGTGGATATGGTTCTGGTGGAACTGCTGGTCCTGGTGGACAACCATTCTCGACAATTTTTCCCACCAGTGTTCGTCCAATTAGTGGAACTGTAACTGCTGCTGGTACTGTAAATGCGACAACATTGACAATTCAACAAATTCCTGGACACACACATAATGCAGGTTCTCAAGTTAATGTCAGTCCTGGATCTCCTGGTATTGGTGGACGTGCTGTAAATGCTCAAGCACCAGCAACATCACCAACTGGAGGTGGAGGTTCTCATACTCACCCATTTGGTGGAAGTGCATCACCATATAGTGGAACTATTGACATGAGAGTTCAATATATTGATGTCATCATTTGTAACTTCACTTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
7afc7e6c2eb9f013b4f995ba5ad8c406ce391a6aeaffe90a775489a4e927d79b
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6049
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Genomic and proteomic characterization of cyanophage S-SCSM1 provides new insights into understanding the viral gene diversity and phage-host interactions Wang,Q., Xu,Y., Jiao,N. and Zhang,R. 2022-10-26 — GenBank