Protein

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Genbank accession
YP_010774405.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence UniProt/TrEMBL
Probability 1,00
TF
Evidence GenBank
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,55
Protein sequence
MPPAIIAGAIAIGASAAASAGIISMTAALVITATATLAGALLTKTSVPSVGAYASVQERKQVLRSSAAAQTYIYGKTVVSGLLFFAEEEEGDQDTDEWVHLAIAVAAHEVDHIGAMWLGDDRIEDYGEHVTYEVHNNRTTADPYMLSKCPSWKSDMIGRGICWIRLSLKFDQEKFPAGIPNFKCEVYGRKCFDPRSGLTQWTDNCALCILDFYRSVLGVLDSDLIMEEFIEAANICDENITGGIYNEPRYRLNGAIDLDESMASVLDDMHETCGGEPTYIGGRHGMLAGAYYGPATMQLTESQIIDNIKIIPETSWKDKINMMTGTFIDPEQGYVETDFPAVKIAAWIAEDGNEFGEDQDFRFVTSVYQAQRLVQIKLNRKRLGRTLDMPLNFCGYQYRPGYYVNVNIPSLGIINQEFRVTKWELQPQGGINVTLRQETAAVWGDSVGQPIDRPDLTHLPGPTVATPTNLAFTPVAENEEVNWQGVLSWVNPTPVIYNQVIIYSGDKTLFSQQVTGTQVQVNGLSKGQTYTAQVRAVSKENIQSGIAQLQFTQPTESKYYGDIYAQNGYFLGTIYANNIVGDIYNKMSGGIDLGPFSWGSAGDHILWNIEGEEFDRVLDSNLIMQMSSSERQYFDLYIRTPGRPDQLIGSFDTGNDGENSPLFFTMEGITVPATGDRSVMNQFVVHVRENRPASVGLIVPLNIQTLVPNTSGSFPGTSFVKDYTTQEPWVALYKKGRTPIHNVG
Physico‐chemical
properties
protein length:744 AA
molecular weight: 82108,55100 Da
isoelectric point:4,72670
aromaticity:0,09946
hydropathy:-0,19610

Domains

Domains [InterPro]
DC_0187
STR
1–595
DC_0187
IPR036116
STR
455–541
IPR036116 DC_0175
IPR013783
STR
464–552
IPR013783
IPR003961
STR
467–540
IPR003961
YP_010774405.1
1 744
Architecture
STR
RBD
STR 1-595 | RBD 596-741 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
YP_010774405.1
1 744
Domain Start End Length (AA) Confidence
N-terminal 1 599 599 0,7924
Central domain 600 733 135 0,5617
C-terminal 734 744 10 0,4250
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-599
Central
600-733
C-terminal
734-744

Taxonomy

  Name Taxonomy ID Lineage
Phage Serratia phage Serbin
[NCBI] 		2562181 Uroviricota > Caudoviricetes > Serbinvirus >
Host Serratia marcescens
[NCBI] 		615 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_010774405.1 [NCBI]
Genbank nucleotide accession
NC_074756.1 [NCBI]
CDS location
range 16080 -> 18314
strand +
CDS
ATGCCACCAGCAATTATAGCCGGTGCAATCGCTATCGGGGCTTCCGCCGCAGCGTCTGCCGGGATTATCAGTATGACCGCCGCCTTGGTCATTACCGCTACGGCCACACTGGCTGGAGCACTGTTAACTAAGACCTCCGTCCCATCTGTGGGGGCATACGCTTCCGTGCAGGAGAGGAAGCAGGTTCTACGAAGTTCGGCGGCAGCCCAGACGTATATCTACGGAAAGACTGTGGTGTCTGGGTTGCTGTTCTTCGCTGAAGAAGAGGAAGGAGACCAGGATACTGATGAGTGGGTTCACCTGGCTATTGCTGTAGCTGCCCACGAGGTTGACCATATTGGCGCTATGTGGCTTGGAGATGACCGGATAGAGGACTACGGGGAGCACGTTACCTACGAGGTGCATAATAACCGTACCACTGCTGACCCATATATGTTGAGCAAATGTCCATCATGGAAATCCGACATGATTGGCCGAGGTATCTGTTGGATTCGTCTCTCCCTGAAGTTCGACCAGGAGAAGTTCCCTGCGGGTATACCCAACTTCAAATGTGAGGTCTATGGTCGTAAGTGCTTCGACCCCCGAAGTGGCTTAACCCAATGGACGGACAATTGCGCCTTGTGCATCCTGGACTTCTACCGGTCAGTGCTCGGGGTACTGGACTCAGACCTGATTATGGAGGAGTTCATCGAAGCCGCCAACATCTGCGACGAGAACATCACAGGGGGCATCTACAATGAGCCTCGTTATCGTCTGAATGGTGCCATTGACCTGGATGAGTCGATGGCGTCCGTCCTGGATGATATGCACGAGACCTGTGGAGGAGAACCAACCTACATTGGTGGTAGACACGGGATGCTGGCCGGTGCTTACTATGGACCTGCCACCATGCAGTTGACCGAGTCCCAAATCATCGACAACATCAAGATCATTCCAGAGACCTCCTGGAAAGACAAGATAAACATGATGACGGGTACCTTTATCGACCCTGAGCAGGGTTACGTAGAAACGGACTTCCCGGCGGTTAAAATCGCTGCATGGATTGCTGAAGATGGTAACGAGTTCGGGGAAGACCAAGACTTCAGGTTCGTCACCTCGGTCTATCAGGCCCAACGCTTGGTACAGATTAAGTTGAACCGTAAGCGTCTTGGCAGAACCCTCGATATGCCCTTAAACTTCTGTGGCTACCAGTACCGTCCGGGTTACTACGTTAACGTCAATATACCGTCCCTGGGAATCATTAACCAGGAGTTCCGTGTTACCAAGTGGGAGCTCCAGCCCCAGGGGGGCATTAACGTCACCCTTCGTCAGGAAACCGCAGCCGTTTGGGGTGACTCAGTTGGCCAGCCAATCGACCGCCCAGACCTGACTCACTTACCAGGCCCAACGGTAGCCACACCAACTAACCTGGCATTCACTCCCGTGGCTGAGAATGAGGAGGTTAACTGGCAGGGGGTTCTGTCCTGGGTTAACCCGACCCCGGTCATCTACAATCAGGTCATCATCTACTCGGGTGACAAGACCCTGTTCTCTCAGCAGGTAACCGGTACTCAGGTCCAGGTCAATGGGTTGAGTAAGGGACAGACTTACACCGCTCAGGTAAGGGCTGTGAGCAAGGAGAATATTCAGTCGGGTATTGCTCAGCTCCAGTTCACCCAGCCAACAGAATCAAAGTACTACGGGGACATCTACGCTCAGAACGGGTACTTCCTGGGTACCATCTATGCCAACAACATCGTTGGGGATATTTATAACAAGATGTCTGGTGGCATAGACCTTGGACCATTCAGTTGGGGTTCAGCTGGAGACCATATTCTGTGGAACATCGAGGGCGAGGAGTTTGACCGTGTACTGGACTCGAATCTCATCATGCAAATGAGTTCTTCAGAACGTCAATACTTTGATCTTTACATCAGGACCCCTGGGAGACCGGACCAACTCATAGGGTCATTCGATACGGGGAACGACGGGGAGAATAGCCCCCTGTTCTTCACCATGGAGGGCATCACAGTGCCAGCCACGGGAGACCGTTCAGTAATGAATCAGTTCGTCGTCCATGTCAGGGAAAATCGCCCCGCCAGTGTGGGACTCATCGTTCCTCTAAATATTCAAACGTTAGTCCCAAACACGAGTGGCTCCTTCCCTGGGACCTCCTTTGTCAAGGACTACACCACGCAAGAACCCTGGGTAGCTCTCTATAAAAAGGGAAGAACCCCAATCCATAACGTTGGTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
d6bc20faf28878d0b0d59ac85bd51cf0c7ad9113b5babf8ec40198a23ad4fa30
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7639
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50