Protein

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Genbank accession
QIN93297.1 [GenBank]
Protein name
tail-collar fiber protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MNFNLVEMYNGLLRFNKHILNELAEGLKHLPNLDGVSKGDSLIINEQGNPAWGSAAFIPTFENAAYGIEWTKDDNDIIRIGNAKFHRELPIQNRLKGCVYNEKKISYFLNPTGWAKPLENGFIPPLDGSDGDVGVRVPEFYMCVKDTGTKYQLWISDFNIDGTFTRVHPFIISHTKTMTRTREDGKEEVFSACIKHDDTRYLGGNKNSSVAATKLQGRPRTGINYDKANEFCANRGDWITMIDYLEYCALQALCYIEYANFDNQAALNINLTSNGFKQGGLGAGVTNLNWERWTAFNGNNPIVQTYWTAEHNIGNGSTNGDHYELGNYNTDGSNLNIYPAVYRGILNFFGDIWTFIRDVAIINRNANYNSVYLLKKGVNHSDITKDNVNEKCYFIGDQANTNNFITEFDFRFGPYFVPNKVGTNKKADYNWKKGNDGQYTDKAVRMLLLGGRAHSGSRAGSGYFFSTWVQSAFDATVGFFTTVKLD
Physico‐chemical
properties
protein length:486 AA
molecular weight: 54808,61920 Da
isoelectric point:6,38452
aromaticity:0,13374
hydropathy:-0,47058

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
QIN93297.1
1 486
Domain Start End Length (AA) Confidence
N-terminal 1 66 66 0,9913
Central domain 67 265 200 0,0023
C-terminal 266 486 220 0,9980
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-66
Central
67-265
C-terminal
266-486

Taxonomy

  Name Taxonomy ID Lineage
Phage CrAssphage LMMB
[NCBI] 		2718472 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QIN93297.1 [NCBI]
Genbank nucleotide accession
MT006214 [NCBI]
CDS location
range 62898 -> 64358
strand -
CDS
ATGAATTTTAATTTAGTAGAGATGTATAATGGCTTGTTAAGATTCAACAAGCATATACTAAATGAACTTGCAGAAGGACTTAAACATTTACCTAATTTAGATGGAGTATCTAAAGGAGATAGTTTAATTATTAATGAACAAGGTAATCCTGCTTGGGGTTCTGCTGCATTTATTCCTACTTTTGAAAATGCTGCTTATGGTATTGAATGGACTAAAGATGACAATGATATAATCAGAATTGGTAATGCTAAATTTCATAGAGAACTTCCTATTCAAAATAGACTTAAAGGTTGTGTCTATAATGAAAAGAAAATCAGTTATTTCCTTAATCCTACGGGTTGGGCTAAACCTCTTGAAAATGGTTTTATTCCTCCTCTTGATGGAAGTGATGGCGATGTTGGGGTAAGAGTTCCTGAATTTTATATGTGTGTTAAGGATACTGGTACTAAATATCAACTTTGGATAAGCGATTTTAATATTGATGGAACATTTACTAGAGTTCATCCTTTTATTATAAGTCATACTAAAACTATGACTAGAACTAGAGAAGATGGTAAAGAAGAAGTATTTAGTGCTTGTATTAAACATGATGATACTAGATATTTAGGTGGAAATAAAAATTCTTCTGTTGCTGCTACTAAATTACAAGGTAGACCTAGAACTGGAATTAATTATGATAAAGCTAATGAATTTTGTGCTAATCGTGGAGATTGGATTACAATGATTGATTATCTTGAATATTGTGCTTTACAAGCTCTTTGTTATATTGAGTATGCTAATTTTGATAATCAAGCTGCATTAAATATTAATTTAACTAGTAATGGATTTAAACAAGGAGGACTTGGTGCTGGTGTTACTAATTTAAATTGGGAGAGATGGACAGCTTTTAATGGTAATAATCCTATTGTACAAACTTATTGGACTGCTGAACATAATATTGGTAATGGTAGTACTAATGGTGACCATTATGAACTAGGAAATTATAATACAGATGGAAGTAATTTAAATATTTATCCTGCTGTTTATCGTGGTATTCTAAATTTCTTTGGTGATATATGGACATTTATTAGAGATGTAGCTATTATAAATCGTAATGCAAATTATAATAGTGTTTATCTTCTTAAAAAAGGTGTTAATCATTCTGATATTACAAAAGATAATGTTAATGAAAAATGTTATTTTATAGGTGACCAAGCTAATACTAATAATTTTATTACTGAATTTGATTTTAGATTTGGTCCTTATTTTGTTCCTAATAAAGTTGGAACTAATAAAAAAGCTGACTATAATTGGAAAAAAGGTAATGATGGACAATATACAGACAAAGCTGTTCGTATGCTTCTGCTTGGCGGTCGCGCTCATTCCGGTTCTCGGGCTGGCTCTGGTTACTTTTTTTCTACTTGGGTTCAGTCAGCTTTTGATGCTACTGTCGGCTTCTTTACCACAGTTAAGCTTGATTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
4b19fa43e8e934f92bc1084c7179e784d37df2dcd750e3c02683497142cf06b3
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7070
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
First crAss-Like Phage Genome Encoding the Diversity-Generating Retroelement (DGR) Morozova,V., Fofanov,M., Tikunova,N., Babkin,I., Morozov,V.V. and Tikunov,A. 2020 32456083 GenBank