Protein

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Genbank accession
WYA87439.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
TSP
Evidence RBPdetect2
Probability 0,95
Protein sequence
MAIYDTGTASLAANGQVTGVGTQWTMPLTLIRVGATIVFKTEPVQIYTISEITSDTSLSVYNPNGETVPAGTGYAILAHDGISVQGLAQNVAETLRYYQSRETSIQSLIDFIGQDSFDWPRFEQLASQSVQGAADALASQIAAAESAATAVSARDTTTSARDATIEAINSAGDAGTLVTLSGWGIGNGSNILSELDFQTFNFVVGGHYRVAFSACTNAPEALKVPSNATLVISVEGGATGTGSRNIQVSTYTGIDGSFRRYHISYNTSGGVRKYYVRESIYLPGGNEAGGANAQRVRGLLDVYSKNETFQKSLNFSDVADKSLARSNLGLSSVDSIYELIKQTNENKNLANVRSYISGSNSGGGLFYWSPLVSKSEHNGITVFSPTVPFDGTYSTLSDFLSGAGETSPGENGCWVRFTGGVDDIHTEWAGHDVSGVNESNASVMACINLGHNTNRKVRISAGRLKVSFSDGVQYNDKYRVLRQTAFFLNGLTVDIFANNDVDIDISGSTSPERVVFGLKDCTFKASGLNWNTDFSDYSIQPTDTEHKPREDWFGFMVEGCASVVIEGMEVNASRAFVNADALNGLPNAFVSLRNSSFRYNANYCLITRNCDYSEFIGNTTKQSGRAWHTFAEDYAISERSRRSYAHANKFYYPISIQSRITPAGNNVTVTDNYYEGSGIFVEVFAANNVICKGNTSIITTDATGRASSHYLLITNDAESDWGVNEGLSNIIISSNIMIGGGVAIQGYQEGIQAKNGLIITGNTMTDTKAPYLTNQAWVGTIFSNNSCKFTPGFGGLAIGGQYPIVKDNIIDGGFVQLRVGYEVVAPTYEGNKFMNTVASSLTTMFDMDNFTGGIFRNNDFRASSFSDIFPLNDNVTKVGFRYVDYGFSARPTDKYGEKCVIRAGDFILNDNPTTYGSAYAWFGATNGAYLQVNTAS
Physico‐chemical
properties
protein length:936 AA
molecular weight: 100923,45800 Da
isoelectric point:5,01737
aromaticity:0,10897
hydropathy:-0,18665

Domains

Domains [InterPro]
DC_0313
STR
1–551
DC_0313
IPR059934
RBD
332–416
IPR059934 DC_0317
WYA87439.1
1 936
Architecture
STR
STR 1-936
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
WYA87439.1
1 936
Domain Start End Length (AA) Confidence
N-terminal 1 439 439 0,9931
Central domain 440 884 446 0,9956
C-terminal 885 936 51 0,9694
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-439
Central
440-884
C-terminal
885-936

Taxonomy

  Name Taxonomy ID Lineage
Phage Pseudomonas phage PsgS01F
[NCBI] 		3122168 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Pseudomonas syringae pv. garcae
[NCBI] 		251653 Pseudomonadota > Gammaproteobacteria > Pseudomonadales > Pseudomonadaceae > Pseudomonas > Pseudomonas coronafaciens

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
WYA87439.1 [NCBI]
Genbank nucleotide accession
PP134917.1 [NCBI]
CDS location
range 23140 -> 25950
strand +
CDS
ATGGCAATTTATGATACTGGCACTGCCAGTTTAGCAGCGAACGGTCAGGTTACTGGAGTTGGCACTCAATGGACCATGCCACTAACACTTATTCGCGTTGGTGCTACAATTGTATTCAAAACAGAGCCAGTACAGATTTACACTATCTCTGAAATCACCAGCGACACTTCATTGTCTGTATATAACCCAAATGGCGAAACTGTTCCTGCTGGTACTGGATATGCCATTCTTGCTCATGATGGGATTAGCGTTCAGGGTTTGGCTCAAAATGTAGCGGAGACACTTCGTTATTATCAGAGTAGGGAAACTAGCATTCAGAGCCTGATTGATTTCATTGGTCAGGATTCTTTTGATTGGCCTCGCTTTGAGCAATTGGCAAGCCAGTCAGTGCAAGGTGCAGCGGATGCTTTAGCTAGCCAGATTGCTGCCGCAGAGAGCGCAGCTACTGCCGTTAGTGCAAGAGATACAACCACATCAGCGAGAGATGCTACTATTGAGGCAATTAATAGTGCTGGTGATGCTGGAACACTAGTTACACTTTCTGGTTGGGGTATCGGTAATGGTAGCAATATTTTAAGTGAACTTGATTTCCAAACTTTTAATTTTGTTGTTGGCGGTCATTATAGGGTTGCTTTCTCTGCTTGCACAAATGCACCAGAAGCATTAAAAGTACCAAGCAATGCTACGCTTGTTATATCTGTAGAGGGCGGAGCAACTGGGACTGGATCAAGAAATATTCAAGTGTCAACCTACACCGGTATCGATGGCAGCTTTAGACGTTATCACATCAGTTACAATACTTCCGGTGGTGTTAGGAAATACTATGTTAGAGAGTCAATCTACTTGCCTGGCGGAAATGAAGCTGGAGGCGCTAACGCCCAGCGAGTAAGAGGTTTACTTGATGTTTACTCAAAAAATGAGACTTTTCAAAAATCATTGAATTTCTCTGATGTTGCGGATAAAAGCCTTGCCAGGAGTAATTTAGGACTATCTTCAGTTGATTCAATTTACGAACTAATCAAACAAACAAATGAGAATAAAAATTTAGCAAATGTAAGGTCTTACATTTCTGGATCAAACTCTGGTGGCGGTCTGTTCTACTGGAGTCCATTAGTAAGTAAGAGCGAACATAACGGGATTACTGTTTTTAGCCCAACGGTTCCATTTGATGGTACATATTCCACTCTTTCAGACTTCCTTAGCGGAGCGGGTGAGACATCACCAGGTGAAAATGGTTGCTGGGTTAGGTTTACGGGAGGTGTTGATGATATCCATACCGAATGGGCTGGTCATGATGTGTCTGGAGTTAATGAATCAAACGCCTCGGTTATGGCATGTATAAACCTTGGTCACAATACAAACAGGAAGGTAAGAATTAGCGCTGGAAGACTGAAAGTCTCATTCTCCGATGGTGTTCAGTACAATGATAAGTACAGAGTGTTAAGGCAAACGGCATTCTTCCTCAATGGACTTACTGTTGACATTTTTGCCAATAATGATGTTGATATTGATATCTCTGGAAGCACATCACCAGAGAGGGTTGTTTTCGGGCTTAAAGATTGCACATTTAAAGCTAGCGGACTCAACTGGAATACTGACTTTTCAGATTACTCAATCCAACCAACGGATACAGAGCATAAACCAAGAGAAGACTGGTTTGGTTTTATGGTTGAAGGATGCGCATCAGTTGTGATCGAGGGTATGGAGGTTAATGCCTCGAGGGCCTTTGTTAATGCCGATGCTCTTAATGGCTTACCTAATGCATTCGTATCTCTTAGAAATTCAAGCTTCAGATACAACGCTAACTACTGCTTAATCACAAGAAACTGTGACTACTCAGAGTTTATAGGAAACACAACAAAACAGTCAGGAAGGGCATGGCATACTTTCGCGGAGGATTATGCAATATCCGAGAGAAGCCGAAGGTCTTACGCTCACGCCAACAAGTTCTATTATCCAATATCTATCCAGTCAAGGATAACCCCGGCTGGCAATAACGTAACGGTTACTGATAACTACTACGAAGGCTCTGGTATATTTGTTGAGGTTTTTGCGGCAAACAATGTTATATGCAAAGGGAATACAAGCATCATAACTACAGACGCTACTGGCAGGGCTTCTTCTCACTACTTACTGATAACAAATGATGCAGAAAGTGATTGGGGTGTTAATGAGGGGTTGAGCAACATTATTATATCCAGCAACATTATGATTGGTGGCGGCGTAGCGATTCAGGGCTACCAGGAGGGAATTCAGGCCAAGAATGGATTGATTATCACCGGGAACACCATGACAGATACTAAGGCACCATACCTTACAAATCAGGCGTGGGTTGGCACTATATTTAGTAATAATAGTTGCAAATTTACACCTGGGTTTGGTGGCTTAGCAATCGGCGGGCAATATCCAATAGTCAAGGACAATATTATTGATGGGGGATTTGTTCAGCTAAGAGTTGGCTATGAAGTAGTAGCTCCGACATATGAAGGCAACAAGTTCATGAATACTGTTGCTTCAAGTTTAACCACAATGTTTGATATGGATAACTTTACAGGAGGAATTTTCAGGAACAATGACTTTAGGGCTTCTAGCTTCTCGGATATTTTTCCTCTTAACGATAACGTAACGAAGGTTGGTTTTAGATATGTTGATTATGGTTTTAGTGCAAGGCCAACTGATAAATATGGAGAAAAGTGCGTAATTAGAGCGGGTGACTTCATCTTAAATGATAACCCAACAACTTACGGATCTGCTTACGCATGGTTTGGTGCAACTAATGGTGCATATCTTCAGGTAAATACAGCTTCATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
19e318391a8881fef0c15285cfafff6c147ed02fc6870f3ec1fe6cdad3281179
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,8621
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50