Protein

View in Explore
Genbank accession
XNS38350.1 [GenBank]
Protein name
central tail fiber J
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,75
TF
Evidence RBPdetect2
Probability 0,96
Protein sequence
MATDKVLKGRKGGSSSSRTPTEQPDDLQSVAKAKILVALGEGEFAGQLTGKDIYLDGTALENSDGSQNFSGVTWEFRAGTQAQKYIQGIPGTENEISVGTEVSSATAWTRTFTNTQLSAVRLRLKWPSLFKQEDDGDLVGYSVNYAIDLQTDGGTWQTVLNTSVTGKTTSGYERSHRIDLPQAGSTWTIRLRKITSDASSAKIGDTMTLQSFTEVIDAKLRYPNTALLYIEFDSSQFNGSIPQISCEPRGRVIRVPDTYDPETRTYSGTWTGAFKWAWTDNPAWIFYDLVVSDRFGLGHRLTAANIDKWTLYQVAQYCDQMVPDGKGGNGTEPRYTCNVYIQDRNDAYTVLRDFAAIFRGMTYWGGDQIVALADMPRDVDYSYTRANVVGGRFTYSSSTTKSRYTTALVSWSDPGNAYADAMEPVFEQALVARYGFNQLEMTAIGCTRQSEANRKGRWGILTNNKDRVVSFDVGLDGNIPQPGYIIAVADELLSGKVMGGRISAVNGRVIKLDRVADAAAGDRLILNLPSGVSQSRTIQAVNGESVTVTTAYSETPQAEAVWVVESDELYAQQYRVVSVSDNDDGTFSITGAWHDPDKYARIDTGAIIDQRPVSVIPPGNQSPPANIVISSFSVVQQNISVETMRVSWDQAQNAIAYEAQWRRNDGNWVNVPRSSTTSFDVPGIYAGRYLVRVRAINAAEISSGWGYSEEKTLTGKVGNPPKPVGFIASENVVFGIELNWGFPANTDDTLKTEIQYSLTGIEDDAMLLADVPYPQRKYQQMGLKAGQIFWYRAQLVDRSGNESGYTEWVRGQASIDVSDITDVILEEIKDSDTFKDLIENAVDSNEKIAGMVDDIKQNADDLEKQALAIQENADGLAQAEVKIDEISVSMDGMSGGVKNSSIAVIQNSMAQVTSRRSQTATNNGNSASIDRIDTTIADTSQAVARALVTLDASAGGNVSNSTDLTETLADFTQASATKINTLTVTSGENTAAITVNAKAVADVNNNLSAMYNIKVGVSSNGQYYAAGMGIGVENTPSGMQSQVIFLADRFAVTTAAGNSVALPFVIQNGQTFIRASFIQDGTIENAKIGNYIQSNNYVAGSAGWKLDKGGTFEINGVAGGGRMLISSTLIRIYDSNNVLRVRMGLW
Physico‐chemical
properties
protein length:1146 AA
molecular weight: 124453,88210 Da
isoelectric point:4,78717
aromaticity:0,08551
hydropathy:-0,30201

Domains

Domains [InterPro]
DC_0014
STR
1–1146
DC_0014
IPR053171
Unmapped
5–844
IPR053171 Coil IPR015406
IPR055385
ATT
92–218
IPR055385 IPR032876 IPR003961
IPR013783
STR
622–714
IPR013783
IPR003961
STR
623–717
IPR003961
IPR036116
STR
637–702
IPR036116
XNS38350.1
1 1146
Architecture
STR
ATT
STR
ATT
STR
STR 1-91 | ATT 92-218 | STR 219-342 | ATT 343-505 | STR 506-1146
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
XNS38350.1
1 1146
Domain Start End Length (AA) Confidence
N-terminal 1 539 539 0,7943
Central domain 540 1087 549 0,0325
C-terminal 1088 1146 58 0,9442
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-539
Central
540-1087
C-terminal
1088-1146

Taxonomy

  Name Taxonomy ID Lineage
Phage Escherichia phage CharmingMan
[NCBI] 		3233690 Viruses >
Host Escherichia coli
[NCBI] 		562 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XNS38350.1 [NCBI]
Genbank nucleotide accession
PP925830.1 [NCBI]
CDS location
range 22116 -> 25556
strand -
CDS
ATGGCTACAGATAAAGTGTTAAAGGGCCGCAAGGGCGGCAGCTCCAGTTCACGAACTCCTACCGAACAGCCTGATGATTTGCAATCTGTAGCGAAGGCAAAAATCCTCGTTGCGCTTGGCGAAGGGGAGTTTGCAGGGCAGCTAACCGGCAAAGATATCTACCTGGACGGAACGGCGCTGGAGAATTCCGACGGCTCCCAAAACTTCAGCGGCGTGACGTGGGAGTTTCGCGCGGGAACGCAGGCGCAAAAGTATATTCAGGGTATTCCCGGCACCGAAAACGAGATCAGCGTGGGAACTGAGGTGTCAAGCGCCACAGCCTGGACGCGAACGTTTACCAATACGCAGCTTTCAGCAGTTCGTCTGCGTCTGAAATGGCCATCGCTTTTCAAACAGGAGGACGACGGCGATCTGGTCGGTTACTCGGTCAATTATGCAATTGACCTGCAGACGGACGGCGGCACATGGCAGACGGTACTCAATACCAGCGTGACCGGCAAAACGACGTCTGGTTATGAGCGCAGCCACCGTATCGATTTACCGCAGGCTGGCAGCACCTGGACAATCCGCCTGCGTAAGATTACCTCTGATGCCAGCAGCGCGAAGATCGGCGACACGATGACGCTGCAGAGCTTCACTGAGGTGATTGACGCCAAATTACGCTATCCAAACACAGCGCTGCTCTACATCGAATTCGATTCCAGCCAGTTTAACGGCTCTATCCCTCAAATTTCATGCGAACCGCGCGGCCGCGTTATCCGCGTTCCAGATACCTACGACCCTGAAACCCGCACTTATAGCGGTACATGGACCGGTGCGTTTAAGTGGGCATGGACGGATAACCCTGCGTGGATTTTTTACGACCTGGTTGTTTCTGACCGGTTCGGCCTCGGACACCGTTTGACTGCTGCGAATATTGATAAATGGACGCTTTATCAGGTTGCCCAGTATTGTGATCAGATGGTACCAGACGGCAAAGGGGGCAACGGTACCGAACCACGTTATACCTGCAACGTGTACATTCAGGACCGGAACGACGCCTACACAGTGCTGCGTGATTTTGCCGCTATCTTCCGTGGCATGACCTACTGGGGTGGGGATCAGATTGTGGCCCTGGCTGACATGCCGCGCGATGTTGATTACAGCTACACGCGCGCTAACGTTGTTGGCGGTCGATTCACCTATTCGAGCAGCACTACGAAAAGCCGCTACACCACAGCGCTGGTATCATGGTCAGATCCCGGTAACGCCTATGCTGACGCGATGGAGCCGGTATTTGAGCAGGCGCTGGTGGCGCGGTACGGTTTCAATCAACTGGAAATGACAGCCATCGGCTGTACCAGGCAGTCAGAGGCGAACCGAAAGGGGCGCTGGGGTATCCTCACCAACAACAAGGATCGCGTTGTTTCGTTTGATGTCGGGCTGGACGGAAACATTCCGCAGCCGGGGTACATCATAGCCGTGGCAGACGAGCTGCTTTCCGGAAAGGTTATGGGCGGCCGCATCAGCGCCGTTAACGGTCGCGTTATCAAACTTGACCGCGTGGCAGATGCAGCAGCAGGTGATCGCCTTATTCTCAACTTACCATCCGGAGTGTCGCAGAGCAGGACCATCCAGGCCGTAAACGGGGAATCAGTCACAGTCACCACGGCATACAGTGAGACGCCACAGGCCGAAGCTGTTTGGGTGGTTGAATCTGACGAGCTCTACGCGCAGCAGTATCGAGTTGTCAGCGTTTCCGATAACGATGATGGTACTTTCTCGATTACCGGCGCATGGCACGACCCGGATAAATATGCCCGTATCGATACCGGAGCCATCATCGACCAGCGGCCGGTGAGCGTGATCCCGCCGGGTAATCAGTCGCCGCCTGCGAATATCGTGATCAGCTCGTTTTCCGTGGTTCAGCAAAATATCAGCGTCGAAACAATGCGCGTGAGCTGGGACCAGGCGCAGAACGCCATCGCCTATGAAGCGCAATGGCGACGTAACGACGGGAACTGGGTTAACGTGCCGCGCAGTTCCACCACTTCGTTCGACGTCCCTGGGATTTATGCCGGGCGCTACCTGGTGCGCGTGCGCGCAATCAATGCCGCAGAAATTTCATCCGGATGGGGCTATTCAGAAGAGAAAACTTTGACGGGTAAAGTGGGCAATCCACCGAAGCCGGTTGGCTTTATCGCTTCTGAAAACGTGGTATTCGGTATCGAGCTGAACTGGGGATTCCCGGCGAATACCGACGACACGCTGAAGACGGAAATTCAGTACAGCCTGACCGGTATCGAGGACGATGCGATGCTGCTGGCCGATGTGCCTTATCCGCAGCGCAAATATCAGCAGATGGGCCTCAAGGCTGGGCAGATTTTCTGGTACCGCGCGCAGCTGGTGGACCGCAGCGGCAACGAATCAGGGTACACAGAATGGGTGCGAGGACAGGCCAGCATCGATGTTTCCGACATCACAGATGTGATCCTGGAGGAAATTAAAGACTCCGATACGTTCAAAGACCTGATCGAGAACGCGGTGGACAGCAATGAAAAAATTGCTGGCATGGTCGATGACATTAAACAGAATGCTGACGACCTTGAGAAACAGGCGCTGGCCATCCAGGAAAATGCTGACGGCCTGGCGCAGGCTGAGGTGAAAATTGACGAGATATCCGTTTCTATGGACGGCATGTCCGGCGGAGTCAAAAATTCCTCGATAGCCGTGATCCAGAACAGCATGGCGCAGGTCACAAGCCGCCGCTCTCAGACGGCGACAAATAATGGGAACAGCGCCAGCATCGACCGTATCGACACCACCATTGCAGATACCAGCCAGGCCGTAGCCCGTGCGCTGGTGACGCTGGATGCGTCTGCAGGTGGCAATGTTTCTAACTCTACCGATCTCACCGAAACGTTGGCTGATTTTACGCAGGCCTCGGCCACGAAAATAAACACGCTGACTGTTACCTCTGGAGAAAATACTGCAGCCATTACGGTAAACGCGAAGGCCGTGGCTGACGTGAACAATAACCTCAGCGCGATGTACAACATCAAGGTTGGCGTTTCCAGCAACGGGCAGTACTACGCCGCGGGGATGGGGATCGGCGTGGAGAATACGCCATCCGGCATGCAGTCGCAGGTTATCTTCCTGGCTGATCGCTTCGCCGTCACCACGGCAGCCGGAAACAGCGTGGCTTTGCCGTTCGTGATCCAGAACGGGCAGACATTCATCCGGGCCAGCTTCATCCAGGACGGCACCATTGAGAACGCCAAAATCGGCAACTATATCCAGTCGAATAACTATGTGGCTGGTTCTGCAGGCTGGAAGCTTGATAAGGGTGGAACGTTCGAAATTAACGGCGTGGCCGGTGGCGGGAGGATGCTGATATCCAGCACCCTCATTCGCATCTACGACAGCAACAACGTGCTGCGTGTCAGAATGGGGTTATGGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
9ebe502dc7f5e5cd660f62089657c07403bf6daa1d061be0358c0d2bc102b351
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7732
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50