Protein

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Genbank accession
APC42909.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TF
Evidence Phold
Probability 1,00
TF
Evidence RBPdetect
Probability 0,88
Protein sequence
MVNSMFGGSLDPYESSLSYEYPYHPSGNPKHIDKRELDNITLADYGWSADAVKAYMFGITVQNPDTGQPMGDDFYNHILERAIGKAERALDISILPDLQHEMRDYYETEFNSYMFVHAYKKPILQVENLQLQFNGRPMYDYPANWWKVEHLAGHVQLFPTALMQTGQSMSYDAVFSGYPQLAGMYPPSRATFAPQMITLDYISGMLPRQRAGRTKPWEVPPELEQLVIKYALKEIYQIWGYDDITLCVA
Physico‐chemical
properties
protein length:249 AA
molecular weight: 28650,17390 Da
isoelectric point:5,00509
aromaticity:0,13655
hydropathy:-0,40562

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Staphylococcus phage StAP1
[NCBI] 		1913667 No lineage information
Host Staphylococcus aureus
[NCBI] 		1280 cellular organisms > Bacteria > Bacillati > Bacillota > Bacilli > Bacillales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
APC42909.1 [NCBI]
Genbank nucleotide accession
KX532239.1 [NCBI]
CDS location
range 27966 -> 28715
strand +
CDS
ATGGTAAACAGTATGTTTGGTGGTAGTTTAGACCCTTACGAAAGCTCTTTATCATATGAGTATCCTTATCACCCATCTGGAAACCCAAAACATATAGATAAAAGAGAATTAGATAATATTACTCTAGCTGATTATGGTTGGTCAGCAGATGCTGTGAAAGCCTATATGTTTGGTATAACAGTACAAAACCCCGATACAGGACAACCTATGGGTGATGATTTTTATAATCATATATTAGAAAGAGCTATAGGTAAAGCGGAAAGAGCTTTAGATATATCTATTTTACCTGACTTACAACATGAAATGAGAGATTACTACGAAACAGAATTTAATAGTTATATGTTTGTACACGCATATAAAAAACCTATATTACAGGTAGAAAATTTACAACTACAATTTAATGGTAGACCTATGTATGATTATCCAGCTAACTGGTGGAAAGTGGAGCATTTAGCAGGTCACGTACAGTTATTCCCTACAGCTTTAATGCAGACGGGTCAATCTATGTCTTACGATGCTGTATTCAGTGGATATCCTCAATTAGCAGGAATGTACCCGCCAAGTAGAGCAACTTTTGCACCTCAAATGATTACATTAGATTATATTAGTGGTATGTTACCTAGACAAAGAGCAGGTAGAACTAAACCATGGGAAGTACCACCAGAATTAGAGCAATTAGTTATTAAATATGCACTAAAAGAAATTTACCAAATATGGGGTTACGATGATATTACCCTGTGTGTAGCGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
1c235b14c398150ed0e804b958339ae1dba78ce1cd7bea2d1b03b622fbc4b58b
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7273
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Complete genome of Staphylococcus aureus phage SAP1 Senevirathne,A.N. and Kim,K.P. 2017-03-21 — GenBank