Protein

View in Explore
Genbank accession
QPX48226.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
Protein sequence
MSLWGNKDSLSNLTGTITIDLATETVTGSGTTFVTAGISTGDILVVGAGATYGQAVITGVTSATQLSIGSTQFLIGIGTVGFGATVGVAYTVTQKPKYTLEDGQYFAPDVKANRFSAVFGVGTTEANVAAGRTVGGKNAAYAVAHAGWVGVTTYVDTHGNFRVKTETLVAGSSITGDADDDGRYPDS
Physico‐chemical
properties
protein length:187 AA
molecular weight: 18946,74070 Da
isoelectric point:4,76830
aromaticity:0,08556
hydropathy:0,14225

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Synechococcus phage S-SRM01
[NCBI] 		2781608 Uroviricota > Caudoviricetes > Pantevenvirales > Serangoonvirus > Serangoonvirus essarone
Host Synechococcus sp.
[NCBI] 		1131 cellular organisms > Bacteria > Bacillati > Cyanobacteriota/Melainabacteria group > Cyanobacteriota > Cyanophyceae

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QPX48226.1 [NCBI]
Genbank nucleotide accession
MW015081.1 [NCBI]
CDS location
range 168734 -> 169297
strand +
CDS
ATGTCTCTTTGGGGCAATAAAGATTCTTTAAGCAATCTTACTGGAACTATCACAATTGATCTTGCTACTGAAACCGTAACTGGTAGTGGCACAACTTTTGTAACTGCAGGAATTTCTACTGGGGATATATTAGTAGTTGGTGCTGGTGCTACATACGGTCAAGCAGTAATTACCGGTGTAACTTCTGCTACGCAACTTTCAATTGGATCAACTCAGTTTCTCATTGGAATTGGCACCGTTGGATTTGGTGCAACAGTAGGCGTTGCTTATACAGTAACTCAAAAACCAAAATACACTCTTGAAGATGGGCAATATTTTGCTCCTGACGTAAAGGCAAATAGATTCTCTGCTGTTTTTGGTGTTGGAACTACTGAGGCAAATGTAGCAGCAGGAAGAACTGTTGGTGGTAAAAATGCTGCTTATGCTGTTGCTCATGCTGGTTGGGTTGGAGTTACAACTTATGTTGATACTCATGGAAACTTCAGAGTTAAAACAGAAACTCTAGTTGCTGGATCTAGCATTACTGGAGATGCTGACGATGATGGTAGATATCCAGACAGCTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
efa8ff71c66220f3cf79cec3c53293447a43d2eb561d805441950dfc418231a9
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,9156
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50