Protein

View in Explore
Genbank accession
QJT70759.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
Protein sequence
MTVLAVYPNKLNRSKCEFTPIKPGQTLNDWMAANIKGYYVSETPPFSYFVNKKQRTSSDWFDYVWQDGDLVELVAEPKDPASIAYAVIAVVAAGAAIYAMNQIPDNFQKTMPEGSPIYEANAQGNRVRLMGIIPELFGRHKTFPDIISEPHWYFSEDEEYLLMMTAIGNGEFELTGDDITISDTPVSKYAGDISYQVFAPGEDVTSHPAHENIYTSREVGSTSSTAGIELEGPINSITPSQVNVVDDTLGVVSDVDGLATEYWPVEWEAGHIIKISGSPGIREITEASGDGGWRNENGADILNFWSRDPDLHNCKQGDYVEYPTNYYVPHEADPVVEYSVGMVDIKQTFEVNGETFYALRILNGEGYWITVDTVPSETRHHPIKFHGTDDGRYIIREANNPKGRVDRLYPEGTKAQVWWDVFTHQGENKGWTLETEVALPGKPAGPHFACPASEVADKIYIDFKHPDGLGYVNKNGDTNALTVEAMIEWRGEGETEWNQVKYERRDGTRDQLAETIEIDLGRKVRPEVRVYRITNDNKDLKYLDRIEYRRLKARLDSNTKYDDFTTIAFKIRGSNSLSRSAENKLGVVPTRKLQITDGFGGWTQELYPTRDIAPAIRYIILDSGLSDVHIGHYELLRLHEVWKARGDTFDAVFTDSSTLFEVLKKVLLVGYSEPTLKYGQIIPVRDEPRTTFDFQYQPDNMLGKGLERSGSFIREEEPDGVEVEYFSTLTWKPETIMCLLPGDLGIKPEKVRAFGVTDPTKAWQFGMRVRRKKRYRRFQYSFQTEMDAFNSNYLDYVALGDDVPGYAQSGRLEGFSIQNGKTHLWLDLPLEWESGVHHITVRKPDGRASGPHVCTKGSHPNEVIITSNLGFTPSLDGEMEPPLWLFGPADKWCYPALINDVTPQGTEKCSVKAVNYDVRVYEDDDNEPDEQGYPKVA
Physico‐chemical
properties
protein length:937 AA
molecular weight: 105886,10040 Da
isoelectric point:4,92279
aromaticity:0,10993
hydropathy:-0,52828

Domains

Domains [InterPro]
DC_0118
STR
1–761
DC_0118 DC_0808
NF040662
Unmapped
453–922
NF040662
IPR055385
ATT
456–546
IPR055385
QJT70759.1
1 937
Architecture
STR
ATT
STR
RBD
STR 1-455 | ATT 456-546 | STR 547-761 | RBD 783-935 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Vibrio phage HY01
[NCBI] 		2736205 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Vibrio campbellii HY01
[NCBI] 		410291 Pseudomonadota > Gammaproteobacteria > Vibrionales > Vibrionaceae > Vibrio > Vibrio campbellii

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QJT70759.1 [NCBI]
Genbank nucleotide accession
MT366580.1 [NCBI]
CDS location
range 16614 -> 19427
strand +
CDS
ATGACTGTACTAGCGGTTTATCCCAATAAGCTCAATCGTAGTAAGTGCGAGTTTACCCCAATCAAACCTGGGCAAACGCTCAATGATTGGATGGCTGCGAACATCAAAGGTTACTACGTATCAGAAACGCCGCCGTTTTCTTATTTCGTGAATAAAAAACAGCGCACTTCCTCAGATTGGTTTGATTACGTTTGGCAAGACGGTGACTTAGTGGAGTTGGTTGCCGAGCCGAAAGACCCTGCAAGTATCGCTTATGCGGTGATCGCGGTGGTGGCGGCTGGCGCAGCTATCTACGCCATGAACCAAATTCCTGACAACTTCCAAAAAACCATGCCAGAAGGCAGTCCGATTTATGAAGCCAACGCACAAGGCAACCGAGTGCGATTGATGGGGATCATCCCTGAGCTGTTTGGACGCCACAAAACCTTCCCTGACATCATCAGTGAGCCGCATTGGTATTTCTCAGAAGATGAAGAGTACCTGCTCATGATGACCGCCATTGGCAATGGCGAGTTTGAGCTTACGGGAGACGACATCACCATCAGTGACACGCCTGTGTCTAAATACGCAGGGGATATCAGTTATCAAGTATTTGCGCCAGGGGAGGACGTGACCAGCCACCCTGCGCACGAAAACATTTACACCTCACGCGAGGTCGGTTCGACGTCTTCAACGGCAGGGATCGAGCTAGAAGGGCCGATTAACTCTATCACTCCGAGCCAAGTTAATGTGGTGGACGATACGCTCGGTGTGGTGAGCGATGTGGATGGGCTCGCCACAGAATACTGGCCTGTTGAATGGGAAGCTGGCCACATCATCAAAATATCCGGTTCGCCTGGTATTCGTGAGATCACCGAAGCAAGTGGTGATGGTGGCTGGCGAAACGAAAATGGGGCAGACATTCTTAACTTTTGGTCGCGTGACCCTGATTTGCATAACTGCAAACAAGGCGATTATGTTGAATACCCGACCAACTATTACGTCCCACATGAAGCCGACCCCGTGGTGGAATATTCCGTGGGCATGGTGGACATTAAGCAGACGTTCGAGGTCAATGGCGAGACGTTCTATGCGCTTCGTATCTTAAATGGTGAGGGTTACTGGATAACGGTCGACACCGTACCGTCAGAAACGCGCCATCATCCCATCAAGTTTCACGGCACGGACGATGGCCGCTATATCATCCGTGAAGCGAACAACCCGAAAGGCCGAGTCGATAGGCTGTATCCCGAAGGAACGAAAGCACAGGTGTGGTGGGATGTCTTCACGCATCAAGGCGAGAACAAAGGGTGGACGCTTGAAACCGAAGTGGCACTGCCTGGTAAACCTGCAGGTCCACACTTTGCCTGCCCAGCTTCAGAGGTGGCGGATAAGATTTACATCGACTTCAAACACCCTGACGGCCTTGGATACGTGAACAAGAACGGTGACACCAACGCGCTCACTGTCGAGGCCATGATTGAATGGCGCGGAGAGGGAGAAACCGAGTGGAACCAAGTCAAGTACGAGCGCCGAGACGGCACTCGCGATCAGCTTGCGGAAACTATCGAAATAGACTTGGGTCGTAAAGTTCGTCCTGAAGTGCGCGTGTATCGCATCACCAACGACAATAAAGACCTCAAGTATTTGGATCGCATCGAGTACCGCCGATTGAAAGCGCGACTTGATAGCAACACCAAGTATGACGACTTCACCACTATTGCCTTCAAAATCCGTGGCAGTAACTCGCTCTCGCGTAGCGCGGAGAATAAGCTGGGCGTAGTGCCCACCCGTAAGTTGCAAATTACAGATGGGTTCGGAGGTTGGACGCAAGAGCTTTACCCGACCCGAGACATAGCACCGGCTATCCGCTACATCATTCTTGATAGTGGATTGAGTGATGTTCACATCGGTCATTACGAGCTGCTGCGTTTGCATGAGGTCTGGAAAGCCAGAGGGGATACGTTCGACGCAGTATTCACCGACAGCAGCACCTTGTTCGAGGTATTGAAGAAAGTCTTGCTCGTCGGTTATTCCGAGCCAACGCTCAAGTACGGTCAAATCATTCCGGTACGGGATGAGCCAAGAACCACTTTTGATTTTCAGTACCAACCGGACAACATGCTCGGTAAAGGCTTGGAGCGCTCAGGCAGCTTTATCCGCGAAGAAGAGCCCGACGGTGTGGAGGTGGAATACTTCTCCACTCTGACATGGAAACCGGAAACCATAATGTGCTTGCTGCCTGGTGACCTCGGCATCAAGCCGGAGAAAGTCAGAGCGTTTGGTGTGACCGACCCAACCAAGGCGTGGCAATTTGGTATGCGAGTGCGACGTAAGAAGCGCTACCGACGCTTTCAGTATTCATTCCAAACCGAGATGGATGCCTTTAACTCTAACTACCTAGATTACGTTGCTTTGGGTGACGATGTGCCAGGTTACGCGCAAAGCGGCAGATTGGAAGGGTTTAGCATTCAGAACGGCAAGACGCACCTATGGCTGGACTTGCCACTGGAATGGGAAAGCGGAGTGCATCACATCACCGTCCGAAAACCCGATGGTAGGGCATCAGGGCCGCATGTTTGCACTAAAGGGAGTCATCCTAACGAAGTCATCATCACCAGTAACTTGGGCTTTACTCCCTCACTAGACGGCGAAATGGAACCACCATTGTGGCTGTTTGGTCCAGCGGATAAGTGGTGTTATCCAGCGCTCATTAATGATGTGACGCCACAAGGCACTGAGAAGTGCAGCGTTAAGGCGGTGAACTATGATGTGCGTGTGTATGAGGATGATGACAACGAACCCGACGAACAGGGGTACCCAAAAGTGGCTTAG

Genome Context

Genome Context

Tertiary structure

PDB ID
764225f4d10a8371c2d9f997b5b275ba72aa16efcb47ffec5a92eb045e312e76
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7491
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
A lysogenic phage of Vibrio campbellii HY01 Nuidate,T., Kuaphiriyakul,A., Surachat,K. and Mittraparp-Arthorn,P. 2021-02-15 — GenBank