Protein

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Genbank accession
YP_009197488.1 [GenBank]
Protein name
lytic tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TF
Evidence Phold
Probability 1,00
TF
Evidence RBPdetect
Probability 0,86
Protein sequence
MFGGGRSEKDIAAGRFDCSSYVRWAYSQLGINLGPLTSTSTETLKNKGTAVKGGIKNAQPGDLLFFDTYKKNGHVVIYLGNNQFIGAQGKTGVGIVDMNSSYGKYFTKRFSGNIRRIAGGGNVGAALGGGGAVMSGAGTGTAYRQAPSNLMGPINNAAKQYGVNPNLIAAIIKKESTFKSGLTSSAGAKGYMQLMPATARAMGVKNPWDTQQNINGGTKYIAQQLKTYKNNIPLALAAYNWGPGNLNKAIRKAGGSKDWNQIRRFAPKETRDYVDKIMGWR
Physico‐chemical
properties
protein length:281 AA
molecular weight: 29983,80110 Da
isoelectric point:10,16049
aromaticity:0,09609
hydropathy:-0,42384

Domains

Domains [InterPro]
IPR000064
ENZ
1–117
IPR000064 IPR023346
G3DSA:3.90.1720.10
RBD
2–121
G3DSA:3.90.1720.10 PTHR37423
IPR000064
ENZ
3–107
IPR000064 G3DSA:1.10.530.10
IPR038765
STR
14–116
IPR038765 IPR008258
G3DSA:1.10.530.10
RBD
160–281
G3DSA:1.10.530.10
cd00254
ENZ
165–279
cd00254
YP_009197488.1
1 281
Architecture
RBD
STR
STR
RBD 1-13 | STR 14-121 | STR 143-281
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Bacillus phage Pavlov
[NCBI] 		1675598 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Bacillus megaterium
[NCBI] 		1404 cellular organisms > Bacteria > Bacillati > Bacillota > Bacilli > Bacillales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_009197488.1 [NCBI]
Genbank nucleotide accession
NC_028782.1 [NCBI]
CDS location
range 18955 -> 19800
strand +
CDS
GTGTTCGGTGGTGGGCGTTCTGAAAAGGACATCGCCGCCGGGCGCTTTGACTGCTCATCTTATGTACGTTGGGCTTATAGCCAATTAGGAATAAACTTAGGACCATTGACCAGCACTTCAACAGAGACATTGAAAAATAAGGGAACGGCAGTAAAAGGCGGCATTAAAAACGCTCAACCCGGCGACTTACTTTTCTTTGATACATACAAGAAAAATGGTCACGTTGTTATTTATCTCGGAAACAATCAATTCATTGGTGCTCAGGGTAAAACAGGTGTCGGCATTGTCGATATGAATAGCTCTTACGGTAAATACTTCACGAAACGTTTTAGCGGCAATATTCGCCGTATTGCTGGTGGTGGAAATGTTGGGGCTGCTCTAGGTGGCGGCGGTGCTGTCATGAGTGGAGCGGGTACAGGTACAGCATATAGACAAGCACCTTCTAACTTAATGGGCCCGATTAATAACGCGGCTAAACAATACGGTGTAAATCCAAACTTAATTGCTGCTATTATTAAGAAAGAATCAACGTTTAAAAGCGGCTTGACATCTTCCGCAGGGGCTAAAGGCTACATGCAATTAATGCCTGCTACCGCTCGTGCTATGGGAGTTAAAAACCCCTGGGATACTCAGCAAAATATTAACGGCGGCACAAAGTATATAGCGCAGCAGCTTAAAACTTACAAGAATAACATACCTCTTGCGTTAGCTGCTTATAACTGGGGACCGGGCAACTTGAATAAAGCTATCCGAAAAGCTGGCGGCAGCAAAGATTGGAACCAAATACGCCGCTTTGCTCCAAAAGAAACGCGTGATTATGTAGATAAAATTATGGGTTGGAGGTAG

Genome Context

Genome Context

Tertiary structure

PDB ID
d0cf4f961692c1d34783ba040e1dd459955ca9d8cc9bbbfb952ef80a34a774ce
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8953
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50