Protein

View in Explore
Genbank accession
WNV49475.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,71
Protein sequence
MTTKVIFTFHSPDGSPQANEKFTVRLTRPGMSDAEHCVVIPETYEMVTDAKGEFTMDLESSTSAYRVTAIGDEDEYEDDPCSQYTFTFYVPDSVDPVYVQELILMPPPNNLPWDEEAMNKIAQAVVDARNARDDAEESADRAEAQVGLAAEQVELAKGQVTLAKAEVTKAAAQADRSKAEADRATTQATNAANSATAAANSATQANTQANRAKTEADRSKSEADRARDLADAMAEKVEGGSLPPLVGMNETFTYEGTNPYRWTVSGPATAVSDGDVMRLTKTDGSGSRAFVRQAVTFPDSHWIVYLRVKTQTGTAAQNRSAQIRFIAADNKDCVVYFNVNANGLVEPNTIHMQGTEGGTRNAATMFTGLSTETWLDLAVKYDAVNRHIELFRRLDTGVWQKGGGRLMVDAIKPAFIEISSMPVAPQNWWLDTDFISVCKPNLICYGDSIAAGQNEYGVTRGSNPYNNNRNWAGTWFGKVPLYATNRNNLVLVQGVEGRRTWQYLSQLSEISNSGVKVVFMHASTNDVNDATMTMDKRTSDTQAIIDQLHAVGAQVVLFNSMQGTKAYNDASSNTVKLRDYTDQWWNTELPKVTGLAQTLDIARLIAKDGYMDPDLASSDGLHLTNASAQKIADKLGQFFSNSSDTNGFAPLDSPAFSGTPTVPTQTPFLPYGKAIANTEYVVTFIQDWTQRYGYGELTMDSRTGAQLSGAGVRSGYYHVPAGAGNPLPSGLNTALAFVDHKSYNTNKGWQLWNPAYTSRLFIRTTNSAGTWQTPVELATFTWLDENNVTKPRTLKFMELPLFNPSGNPSLSGFVPIQDSADGGWRNLSATPTGVALLSAPSAGGALSYLGGMPIANQTLPSNSIDNAALNGFYSVPNGTAGLPLGMEGTNGHAGITSVFDNSTKYQLLFPRTGGAGSYATSVFYRARSNNGWESWVRLLASNQLEGSVTTEPLTTAIFQNNGNNNQNVGRSVRFADGTQIVYATIRLTYSAVDVLQYTYTYPMGFVAPPTITVQPILGARADINDMPYFAVTSPFTYNVGNGNALVQIYRVAGYTGHSFASTSFINCALIAVGRWK
Physico‐chemical
properties
protein length:1076 AA
molecular weight: 116718,53460 Da
isoelectric point:5,15668
aromaticity:0,09572
hydropathy:-0,32323

Domains

Domains [InterPro]
DC_0617
ATT
1–66
DC_0617 DC_2023 IPR036514
Coil
Unmapped
118–152
Coil Coil Coil DC_0711
IPR051532
Unmapped
217–639
IPR051532
SSF52266
STR
439–637
SSF52266
cd00229
ENZ
442–638
cd00229
IPR013830
ENZ
444–627
IPR013830
WNV49475.1
1 1076
Architecture
ATT
ATT
STR
ATT 1-66 | ATT 94-404 | STR 405-1075 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
WNV49475.1
1 1076
Domain Start End Length (AA) Confidence
N-terminal 1 243 243 0,9930
Central domain 244 488 246 0,5476
C-terminal 489 1076 587 0,6690
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-243
Central
244-488
C-terminal
489-1076

Taxonomy

  Name Taxonomy ID Lineage
Phage Pseudomonas phage L15
[NCBI] 		3046822 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Pseudomonas aeruginosa
[NCBI] 		287 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Pseudomonadales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
WNV49475.1 [NCBI]
Genbank nucleotide accession
OQ992559.1 [NCBI]
CDS location
range 24454 -> 27684
strand +
CDS
ATGACTACCAAGGTGATCTTCACCTTCCACAGCCCGGATGGTAGCCCGCAGGCGAACGAGAAGTTCACCGTGCGGTTGACCCGTCCTGGTATGAGCGATGCAGAGCACTGTGTCGTTATTCCCGAAACCTACGAGATGGTGACCGACGCCAAGGGCGAGTTCACCATGGACCTGGAATCGTCTACCTCTGCCTACCGCGTCACCGCTATAGGCGATGAAGACGAGTACGAGGACGATCCCTGCTCGCAGTACACCTTCACCTTCTACGTACCGGACTCTGTTGATCCGGTCTACGTACAAGAACTGATCCTCATGCCTCCGCCCAACAACTTGCCGTGGGACGAGGAAGCCATGAACAAGATCGCCCAAGCGGTGGTCGATGCTCGCAATGCACGAGACGATGCCGAAGAGTCGGCTGACCGTGCAGAGGCTCAGGTTGGTTTGGCTGCTGAGCAAGTCGAGCTTGCGAAAGGACAAGTGACTCTTGCAAAGGCAGAGGTGACCAAGGCTGCTGCTCAGGCTGACCGCTCCAAGGCGGAAGCTGATCGAGCCACTACCCAGGCCACGAACGCAGCCAATTCAGCTACTGCTGCGGCCAACTCCGCCACCCAAGCCAACACTCAAGCCAACCGTGCGAAGACGGAAGCCGACCGCTCCAAGAGTGAGGCTGACCGTGCACGGGATCTGGCTGATGCCATGGCTGAGAAAGTCGAGGGTGGATCTCTGCCTCCGCTGGTGGGCATGAACGAAACCTTCACCTACGAAGGCACCAACCCTTATCGGTGGACTGTCTCCGGCCCTGCTACGGCTGTATCGGATGGCGACGTCATGCGCCTCACCAAGACCGATGGCAGTGGTTCCCGTGCATTCGTGCGGCAGGCAGTGACCTTCCCGGACAGCCACTGGATCGTCTACCTGCGGGTGAAGACGCAGACTGGTACTGCTGCTCAGAACCGCTCTGCCCAGATCCGGTTCATCGCTGCCGACAACAAGGACTGCGTGGTCTACTTCAACGTCAATGCGAATGGCTTGGTCGAACCTAATACCATCCACATGCAGGGCACCGAGGGCGGTACCCGTAACGCAGCAACCATGTTCACTGGTTTGAGTACCGAAACGTGGTTGGACTTGGCTGTGAAGTACGATGCGGTTAACCGTCACATCGAGCTATTCCGCCGACTCGATACGGGTGTCTGGCAGAAGGGTGGTGGTCGTTTGATGGTAGATGCCATCAAGCCTGCTTTCATCGAGATCTCGTCGATGCCGGTAGCCCCGCAGAACTGGTGGCTGGATACTGACTTCATCTCGGTGTGCAAGCCCAACCTTATCTGCTACGGCGACAGCATTGCCGCTGGGCAGAACGAGTACGGGGTCACTCGTGGTAGCAACCCCTACAACAACAACCGCAACTGGGCTGGTACCTGGTTCGGCAAGGTTCCGCTCTACGCCACCAACCGGAACAACCTGGTGCTTGTCCAGGGCGTGGAAGGCCGTCGTACCTGGCAGTACCTGAGCCAGCTGTCGGAGATCTCCAACTCCGGTGTGAAGGTAGTCTTCATGCATGCCAGCACGAATGACGTGAACGATGCCACCATGACCATGGACAAGCGTACGTCGGACACCCAAGCCATCATCGACCAGCTTCACGCTGTCGGTGCTCAGGTAGTGCTGTTCAACTCAATGCAGGGTACCAAGGCATACAACGATGCCTCGTCCAACACGGTCAAGCTACGGGACTACACCGACCAGTGGTGGAACACCGAACTGCCCAAGGTCACTGGTTTGGCCCAGACCCTGGACATCGCACGTCTCATCGCCAAGGACGGGTACATGGACCCTGATCTTGCTTCGAGTGATGGGCTGCATCTGACCAATGCTTCGGCACAGAAGATCGCTGACAAGCTCGGCCAGTTCTTCTCCAACTCCAGCGATACCAATGGTTTCGCTCCGTTGGATAGCCCGGCCTTCTCTGGTACTCCGACTGTCCCCACGCAGACTCCTTTCCTGCCGTACGGCAAGGCTATCGCCAACACCGAGTACGTGGTCACGTTCATCCAAGACTGGACTCAACGGTACGGCTACGGTGAACTCACCATGGATAGCCGGACTGGTGCTCAGCTGTCTGGTGCGGGTGTTCGCAGTGGCTACTACCATGTCCCTGCCGGTGCAGGTAACCCCTTGCCTTCTGGCTTGAACACTGCCCTGGCTTTCGTGGACCACAAGTCCTACAACACCAACAAGGGATGGCAGCTGTGGAATCCGGCATACACTAGCCGTCTGTTCATCCGTACTACCAACTCCGCTGGCACGTGGCAGACCCCGGTAGAGCTGGCTACCTTCACCTGGCTGGACGAGAACAACGTCACCAAGCCACGAACCCTGAAGTTCATGGAACTGCCGCTGTTCAATCCCTCAGGTAACCCTTCCCTGTCTGGCTTCGTACCGATCCAGGACAGTGCAGATGGTGGCTGGCGTAACCTGTCTGCCACTCCTACTGGTGTGGCTTTGCTCAGCGCTCCTTCGGCTGGAGGAGCGCTGAGCTACCTTGGCGGTATGCCCATCGCAAACCAGACCCTTCCGAGCAACAGCATCGATAACGCAGCCCTCAACGGCTTCTACTCGGTGCCGAATGGAACTGCTGGTCTTCCGCTGGGCATGGAAGGTACGAACGGCCACGCTGGTATCACTTCGGTCTTCGACAACTCCACGAAGTACCAGCTGCTTTTCCCGCGTACTGGTGGTGCTGGTTCCTACGCTACCTCTGTGTTCTACCGTGCTCGGTCGAACAACGGATGGGAAAGCTGGGTGCGGTTGTTGGCTTCGAACCAACTGGAGGGTTCGGTAACCACTGAACCGCTGACTACTGCTATATTCCAGAACAACGGCAACAACAACCAGAACGTGGGCCGTTCTGTACGTTTCGCTGACGGTACTCAGATCGTCTACGCAACGATACGGCTCACTTACTCTGCGGTGGATGTGTTGCAGTACACCTACACTTACCCGATGGGTTTCGTGGCACCACCGACTATCACTGTGCAGCCTATCCTTGGTGCTCGTGCTGACATCAACGATATGCCTTACTTCGCTGTGACCAGCCCGTTCACCTACAACGTGGGTAACGGTAATGCTCTCGTGCAGATCTACCGGGTTGCTGGGTATACTGGGCACAGCTTTGCCAGTACTTCATTCATTAACTGCGCACTGATCGCGGTAGGACGGTGGAAATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
450415cb99c8ec20def6db77dc02e3ce5ce03e92b21bb58215766666f4cf7b5f
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6677
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Jumbo phages are active against extensively-drug-resistant eyedrop-associated Pseudomonas aeruginosa infections Cobian Guemes,A.G., Ghatbale,P., Blanc,A., Morgan,C., Garcia,A., Leonard,J., Huang,L., Kovalick,G., Proost,M., Chiu,M., Kuo,P., Oh,J., Karthikeyan,S., Knight,R., Pogliano,J., Schooley,R. and Pride,D. 2024-10-29 — GenBank