Protein

View in Explore
Genbank accession
CAH9012726.1 [GenBank]
Protein name
putative methyl-accepting chemotaxis protein
RBP type
TSP
Evidence RBPdetect
Probability 0,71
Protein sequence
MTINYDNYNNRLEAATSEAEDSSAKFRAVANGDENTEVPLDTGSTPSIRKFLKEQESKINVGAQSVLAQCTEQKDLAEAQATIATEQVELAENQVTAATEQATLAAASAAKAEEVAGLTQVQEAIDLTLSEFAGLMTESEVRAIQATNLNHFDASGMVHMGRSLVALSAGKINEGMMVSSGASLSLTGQIGLGLAANSTQPSLGTSETKHPILHVAGSTPNISTIEENLTGYGARFKLPEAEDGTRIYDSTGDARGSGKASLDLKVDVDPKYGNAPTGTEGQILREGVGRAFEGVLKNGDVRLGDNGDWSASGDSSVSQGYLEAINGGGSVSFTQTFNAELGKTYKLSMSYKDKVGARLRFTLSGIVDFPYIADEGDGTYSIEWVSTVTGNVLLVINRGVGDTSTWKVSDVSIKPVTEEVVTHPVDGVFLEYYEEELTDPREEVMECIQSLSTTFGDTDVPTVLSTRPLSYFQQYDGQFADPTLPNDKYRCVVWGDLTDEQKRKVAAYMGEKLFIGVNGNIVNGRLRARTIRGAGNGDWLSVRPTEGTGLSFGTSVASRVAAQGALDSSEAYSINKPYMSKASNSESFVEPSDFSLWYLRDLSSTQDIAYQGRCFMYVVATVPRANKGAYHPDLNPWGTAFLKRLSAAGGKPWHDSSITYTPTHAECFIEVPYATSGKKGYEQNTGKISNGQSGHPDGIFYDGIEAGGLNGVIDLRLGAVANDSPSEVSKTLSKVENGTYRGLEKLVRTIPVATKVTKVGSYGGYSYVGIGEVISQYTSAAASEGNVFGQVIATDGTMYDIYTAHGTAGTEFRIRNHGTLNPATGHTGKLPVGADITIVLTQPINLSVSGEFNTQMVIGDPANLLLTDALKNGWLGTWCPVIPNGVIGANEFYLTRKCLEPSIGMIYTEDNGGTWANAAQSISNVTNSRTNTSAYPTTRVIIHNYKAFAKQTKPSTNKPVYNGKAGLMGVFVTSDYRESSGVHLAESLISKVLKASTGNRKQTVNLTAHELWELGQLSTGSGEPRHIPFDNVSAPNNNSPAIKILPYQISNNGQGSIGFQANELTWKAPVVTEETATTSTVVDGSLYRPVTGSGATSLMYITVQATYDGGINWANYSLIDGKIYANTDLTKPTPNMVVWNGSGWGDDDTIKITSDGSDTFVDRNGIVNESVVHELAIPCTWISNRARSGEQVEGVDL
Physico‐chemical
properties
protein length:1197 AA
molecular weight: 127975,70330 Da
isoelectric point:4,95098
aromaticity:0,07769
hydropathy:-0,29323

Domains

Domains [InterPro]
DC_1387
STR
1–1197
DC_1387
Coil
Unmapped
5–25
Coil Coil
CAH9012726.1
1 1197
Architecture
STR
STR 1-1197
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
CAH9012726.1
1 1197
Domain Start End Length (AA) Confidence
N-terminal 1 427 427 0,5981
Central domain 428 683 257 0,9297
C-terminal 684 1197 513 0,1990
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-427
Central
428-683
C-terminal
684-1197

Taxonomy

  Name Taxonomy ID Lineage
Phage Vibrio phage 424E50-1
[NCBI] 		2963198 No lineage information
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
CAH9012726.1 [NCBI]
Genbank nucleotide accession
OX241437 [NCBI]
CDS location
range 37906 -> 41499
strand +
CDS
ATGACCATTAATTACGACAACTACAATAATAGATTAGAAGCTGCTACTTCTGAAGCAGAAGATAGTAGTGCTAAATTCCGTGCCGTTGCTAACGGAGATGAGAATACAGAAGTACCTTTGGATACGGGTTCCACCCCTTCTATCCGTAAATTCCTAAAAGAGCAAGAAAGCAAAATCAACGTAGGAGCACAATCAGTATTAGCTCAGTGTACTGAACAAAAAGATTTAGCAGAAGCTCAAGCTACTATTGCTACTGAACAGGTAGAATTAGCTGAAAATCAAGTTACGGCTGCTACTGAGCAGGCGACACTAGCCGCCGCATCTGCTGCAAAGGCAGAAGAAGTAGCCGGACTAACCCAAGTACAAGAGGCTATAGATCTTACTTTAAGTGAGTTCGCAGGCTTGATGACTGAATCAGAAGTTCGTGCAATCCAAGCAACCAACCTAAACCACTTTGATGCTAGTGGTATGGTTCATATGGGTCGTAGTTTAGTAGCTCTCTCTGCCGGAAAGATAAACGAAGGTATGATGGTTTCCAGCGGGGCATCATTATCCCTTACTGGTCAAATTGGACTCGGTCTTGCGGCGAATAGTACTCAGCCGTCTTTAGGTACAAGCGAAACTAAACATCCTATATTGCATGTAGCAGGTTCCACACCAAATATCTCTACAATTGAAGAAAACCTAACAGGTTACGGGGCTAGATTTAAGCTACCAGAAGCCGAAGACGGTACACGCATTTATGATTCAACAGGTGATGCCCGTGGTAGTGGTAAAGCAAGCCTAGACCTAAAGGTAGATGTTGACCCTAAGTACGGTAACGCTCCAACAGGTACAGAAGGGCAGATTCTTAGAGAGGGTGTTGGGCGAGCTTTTGAAGGTGTACTAAAGAATGGTGATGTCCGTCTAGGTGATAATGGGGATTGGTCAGCTAGTGGGGATTCAAGTGTGTCTCAGGGCTACTTAGAGGCTATCAATGGCGGCGGTTCTGTGTCATTCACGCAAACATTCAACGCTGAGCTAGGAAAAACTTACAAGCTCTCTATGAGCTATAAAGACAAGGTTGGTGCTCGACTAAGATTTACGTTGAGTGGAATTGTTGATTTCCCTTACATCGCTGATGAGGGTGATGGGACGTATTCCATTGAATGGGTATCAACTGTAACGGGCAATGTGTTATTGGTTATAAATCGAGGGGTGGGTGATACTTCTACATGGAAAGTGTCTGATGTATCAATCAAACCAGTAACAGAAGAAGTAGTAACACACCCTGTAGACGGTGTTTTCCTTGAGTATTACGAAGAAGAACTAACAGACCCTCGCGAAGAGGTTATGGAATGTATTCAATCGTTGTCTACTACGTTCGGTGATACCGATGTGCCGACCGTTCTATCAACTCGCCCTCTTTCATACTTCCAACAGTATGACGGGCAGTTTGCAGACCCTACATTACCGAATGACAAATACCGTTGTGTTGTTTGGGGCGACTTAACCGATGAGCAAAAGCGCAAGGTTGCTGCTTACATGGGTGAAAAGCTGTTTATAGGTGTTAACGGTAATATTGTTAATGGTCGTTTACGTGCGCGTACTATTCGTGGTGCGGGTAATGGTGATTGGTTGTCAGTGAGACCAACTGAGGGTACAGGTCTGTCATTCGGCACAAGTGTAGCGTCAAGAGTCGCAGCTCAGGGCGCTCTGGACAGCAGTGAGGCGTATTCAATAAATAAGCCTTACATGAGTAAAGCGTCTAACTCTGAGTCTTTTGTCGAACCTTCTGATTTTTCTCTTTGGTATCTCAGGGATTTGTCGTCGACACAGGATATTGCATACCAAGGTCGTTGCTTTATGTATGTAGTAGCTACCGTACCTAGAGCGAATAAAGGGGCGTATCATCCTGATTTGAATCCGTGGGGCACTGCTTTTTTGAAAAGATTGTCGGCAGCAGGAGGGAAACCTTGGCACGATTCATCAATCACGTACACCCCTACACATGCAGAGTGTTTTATAGAAGTTCCTTACGCAACCTCAGGTAAAAAAGGGTATGAGCAGAATACGGGTAAAATTTCCAACGGACAGTCAGGCCATCCAGACGGCATTTTCTACGACGGTATCGAAGCGGGTGGTTTGAATGGCGTTATTGATTTGCGTCTAGGCGCTGTAGCCAATGACTCTCCGTCAGAGGTAAGTAAGACTCTATCTAAGGTAGAGAATGGTACTTATCGTGGTTTGGAAAAGTTGGTCAGAACTATACCGGTTGCAACAAAAGTTACAAAAGTTGGTTCTTACGGGGGCTACTCTTATGTTGGTATTGGTGAGGTTATTTCACAATATACGTCTGCCGCAGCATCTGAGGGTAATGTATTCGGACAGGTAATCGCAACTGATGGAACAATGTATGATATCTACACTGCTCACGGAACAGCAGGTACAGAGTTTAGAATTCGTAATCACGGAACTCTAAACCCTGCTACGGGGCATACAGGCAAGTTACCTGTAGGTGCTGATATCACAATTGTACTAACTCAACCAATCAACCTATCAGTATCAGGTGAGTTCAATACTCAAATGGTTATTGGCGACCCTGCTAATCTCCTGCTAACTGATGCGCTTAAAAATGGTTGGTTGGGAACTTGGTGTCCGGTTATTCCTAACGGAGTTATTGGTGCCAATGAGTTTTACCTTACCAGAAAGTGCCTAGAACCCTCTATCGGCATGATCTACACAGAGGATAACGGTGGCACTTGGGCTAATGCAGCTCAAAGTATAAGTAATGTAACCAACAGCCGTACAAATACAAGCGCTTACCCGACTACAAGGGTGATTATCCATAACTACAAAGCATTCGCCAAGCAAACCAAACCAAGCACTAACAAACCTGTTTACAATGGTAAGGCGGGGTTGATGGGTGTGTTTGTGACTTCTGACTATAGAGAATCATCAGGCGTTCACCTTGCAGAGTCGTTAATATCTAAGGTGCTAAAAGCATCCACAGGTAACAGAAAGCAAACTGTAAACCTAACGGCGCACGAATTGTGGGAGCTAGGACAACTTAGCACTGGCTCAGGCGAACCACGTCACATACCTTTTGATAATGTTTCCGCACCAAACAACAACAGTCCTGCGATTAAAATCCTACCTTACCAAATCAGCAACAACGGTCAGGGTAGTATTGGGTTTCAAGCTAACGAGTTGACTTGGAAAGCTCCGGTAGTTACGGAAGAGACAGCAACAACTTCTACTGTAGTTGACGGTTCGCTTTACAGACCTGTCACTGGCTCTGGCGCAACAAGTTTAATGTACATCACTGTACAGGCAACTTATGACGGTGGAATAAATTGGGCTAACTATTCATTAATTGATGGCAAAATTTATGCAAACACAGACCTAACAAAGCCAACACCTAATATGGTTGTATGGAACGGTTCTGGTTGGGGTGATGACGACACAATCAAAATCACCTCAGATGGTAGTGATACCTTTGTGGATAGAAACGGTATCGTTAATGAGTCGGTAGTTCACGAACTGGCTATACCTTGCACATGGATAAGTAACCGAGCACGTTCAGGTGAGCAAGTCGAAGGCGTGGATCTTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
dc18d398fe0ec7c018ceb5519c8a689587375fb70f2809e6bb38d19b7358580a
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,2762
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50