Protein
View in Explore- Genbank accession
- CAB4132319.1 [GenBank]
- Protein name
- Bacteriophage P22, Gp10, DNA-stabilising
- RBP type
-
TSPTSP
- Protein sequence
-
MPYSKTPAIQTYETKRVNFISNPQQRGTNAAQDFRLLNMMVEVIKSPVGDQSKYFIKSRPGVATAFTTATGEGRGIYYWVRSGTGYCMAVVGNKVYANGTSVLTLSTSTGTVGFTEFVSSTGTVSLILLDGTDGYVFSDSTTSTKITSANFPSPHVPTPVFIDAYLFVAKADSEDIYNSNLDDPLTWTAGDFISAEMYPDKIVALSKNNNYIYAIGSSSTEYLYDVANATGSPLGRHDSAVQQFGTAARDSVVQTEVEVIMIGETNNGGHTVWTIDGFKAAEIGIPAVKSALLAEGSNLKDAQAFCIRVAGQKCYAICLTNRTMVYSFDTKMWHEWGTGSGAFLCTHAADGPNGSAYVLDKSNGKIYTMDETIFTDAGTAINCVFTSAKLDFDTINRKFMYRLSIIGDVPDSTGTDLAVSVQWSDDDYKTFSTARTLNFNADLPKIDQLGQFRRRAFKLTYSLPHLLRLEGLEVDINKGSI
- Physico‐chemical
properties -
protein length: 481 AA molecular weight: 52356,20290 Da isoelectric point: 5,26985 aromaticity: 0,10811 hydropathy: -0,13347
Domains
Domains [InterPro]
DC_1658
STR
2–480
STR
2–480
SSF101898
RBD
127–370
RBD
127–370
1
481
Architecture
STR 2-480 |
Legend:
ATT
STR
RBD
CBM
LEC
ENZ
CHP
LNK
TAS
TTP
UNK
Unmapped
Tail Spike Domain Segmentation
Tail Spike Domain Segmentation
This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.
Domain Layout
1
481
| Domain | Start | End | Length (AA) | Confidence |
|---|---|---|---|---|
| N-terminal | 1 | 153 | 153 | 0,4537 |
| Central domain | 154 | 352 | 200 | 0,0180 |
| C-terminal | 353 | 481 | 128 | 0,8835 |
Note: Constraints were applied during segmentation.
Fixed 84 C-terminal predictions appearing before Central domain
Fixed 84 C-terminal predictions appearing before Central domain
Legend:
N-terminal
Central domain
C-terminal
3D Structure with Domain Coloring
The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).
Domain Coloring
N-terminal
1-153
1-153
Central
154-352
154-352
C-terminal
353-481
353-481
Taxonomy
| Name | Taxonomy ID | Lineage | |
|---|---|---|---|
| Phage |
uncultured Caudovirales phage [NCBI] |
2100421 | Uroviricota > Caudoviricetes > Peduoviridae > Maltschvirus maltsch > |
| Host | No host information | ||
Coding sequence (CDS)
Coding sequence (CDS)
Genbank protein accession
CAB4132319.1
[NCBI]
Genbank nucleotide accession
LR796267
[NCBI]
CDS location
range 11449 -> 12894
strand +
strand +
CDS
ATGCCTTACAGTAAAACCCCTGCTATACAAACATACGAAACTAAGAGAGTCAATTTCATCTCCAATCCTCAGCAGCGCGGTACTAATGCTGCACAGGATTTCCGTCTGTTAAACATGATGGTGGAGGTGATTAAGAGTCCTGTTGGCGATCAAAGCAAGTATTTTATTAAGAGTCGTCCAGGTGTAGCGACGGCTTTTACTACAGCCACAGGCGAAGGTCGTGGTATTTATTATTGGGTTAGAAGTGGTACTGGCTATTGCATGGCTGTTGTTGGTAACAAAGTTTATGCAAACGGTACGTCTGTTTTAACCTTATCAACATCTACAGGAACTGTTGGCTTTACAGAGTTTGTTAGCTCTACAGGAACAGTTTCTCTTATTCTACTAGATGGTACAGACGGGTATGTGTTTAGTGATTCCACTACATCTACAAAGATAACAAGTGCAAACTTCCCTTCTCCGCATGTACCAACTCCTGTTTTTATTGATGCCTATTTGTTTGTTGCTAAAGCAGACAGTGAAGACATTTATAACAGTAACTTGGATGACCCTTTAACATGGACAGCAGGAGACTTTATCTCTGCTGAAATGTATCCTGATAAGATTGTAGCGTTGTCTAAAAACAACAACTATATTTATGCCATTGGGTCTAGTAGTACTGAATACTTATATGATGTAGCTAATGCTACAGGAAGTCCCCTAGGACGTCATGACTCTGCTGTGCAACAGTTTGGTACTGCTGCCAGAGACTCGGTTGTACAAACTGAGGTAGAGGTTATTATGATTGGGGAAACAAACAACGGTGGACACACAGTGTGGACCATTGACGGGTTTAAAGCAGCCGAAATTGGTATCCCTGCAGTAAAGAGTGCGCTCCTTGCAGAAGGTTCCAATCTTAAAGATGCACAAGCATTCTGTATACGTGTGGCAGGACAGAAATGTTATGCTATTTGTTTAACTAACAGAACAATGGTTTATAGCTTTGATACAAAAATGTGGCATGAATGGGGTACAGGAAGCGGAGCATTCTTATGCACACACGCTGCAGATGGTCCTAATGGAAGCGCCTACGTGCTTGATAAAAGCAACGGTAAGATTTACACAATGGATGAAACGATCTTTACTGACGCTGGAACAGCCATCAATTGTGTTTTTACTTCTGCTAAGCTGGACTTTGATACCATTAACCGTAAATTTATGTATCGTTTATCGATCATAGGTGATGTTCCTGATTCTACAGGAACTGACTTAGCGGTGTCTGTGCAATGGTCAGATGATGACTATAAGACATTTAGTACAGCTCGTACATTAAACTTTAATGCTGATCTTCCTAAGATTGACCAGCTAGGACAGTTTAGACGACGTGCTTTCAAACTAACCTACAGCCTTCCACACTTGCTTCGTTTAGAAGGTTTGGAAGTGGACATTAACAAAGGTAGTATCTAA
Genome Context
Genome Context
Tertiary structure
PDB ID
a55d474fa0680a4dbdfc35241e612a7010674ad936598c784d63c83477c4baa7
Model Confidence
Very high
pLDDT > 90
pLDDT > 90
High
90 > pLDDT > 70
90 > pLDDT > 70
Low
70 > pLDDT > 50
70 > pLDDT > 50
Very low
pLDDT < 50
pLDDT < 50