Protein

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Genbank accession
USH90190.1 [GenBank]
Protein name
tail spike protein
RBP type
TF
Evidence Phold
Probability 1,00
Protein sequence
MSYKKDDFLDDKFFNSRQPYYNDESDYQTNAPSYYDDLARFRKLMRYLVEKVGHYDKELADRFKQWDELISKFPEDVEKLLREWLQDGTMKGLIDELLIGLNAFIERYEKESLVRDKLIARKPDLEGYYTEHKISTYRDDISNTTYWIAHIPKYDKEGNQIEIKAGLAPKQYLDPPKTVREFANREGSTLAINASTFSDTTLRLHGLFMVDGKVIADGTSDPAKYTLAISKDGKMRSYIPNTSADRIKIDGYETALTGFMPLIENGKAVDQSILDLNTSITQNAHPRTAVGQNANGDTFFFVSTGRLMGEYGMTAKDMIRVMLKHGFTFAFMLDGGGSSSMVEYGSVVNRLSGSVLTENGGTERPVGNVLYIKKGEPSKESKKLMEIIGESAFRSHRFTMMLEGMRFLPSSWYAMEKYLVNGWKNFSGIGSNACRFHIHTNNQITMMGTIAGGRSGTVFMQLPPEIAPMFTTHHIAIGNTSGEIYKVVVATDGTLTVYNWNPNIPKDIIEYVKLDDIAFAINPPVQGKPRPPFKPLKE
Physico‐chemical
properties
protein length:538 AA
molecular weight: 60867,58950 Da
isoelectric point:6,45500
aromaticity:0,10781
hydropathy:-0,44294

Domains

Domains [InterPro]
DC_1118
ATT
116–159
DC_1118 IPR018711 DC_0578
PTHR40446
Unmapped
136–374
PTHR40446
IPR018711
STR
188–375
IPR018711
USH90190.1
1 538
Architecture
ATT
STR
RBD
ATT 116-159 | STR 188-375 | RBD 376-528 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Kurthia phage vb_KgiM_P1
[NCBI] 		2951632 No lineage information
Host Kurthia gibsonii
[NCBI] 		33946 cellular organisms > Bacteria > Bacillati > Bacillota > Bacilli > Bacillales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
USH90190.1 [NCBI]
Genbank nucleotide accession
ON637248.1 [NCBI]
CDS location
range 8823 -> 10439
strand +
CDS
ATGTCCTATAAAAAAGATGATTTTTTAGATGATAAGTTCTTTAATTCTCGACAACCATATTATAATGATGAATCAGATTATCAAACCAATGCACCTAGCTATTATGACGATTTAGCAAGGTTCAGAAAACTAATGCGTTACCTAGTCGAAAAAGTGGGTCATTATGATAAAGAATTGGCAGACCGTTTCAAACAATGGGATGAACTTATTTCAAAGTTCCCAGAAGATGTTGAAAAATTATTGCGTGAATGGTTACAAGATGGCACAATGAAAGGCTTAATTGATGAACTTTTAATTGGTTTAAATGCTTTCATAGAACGCTATGAAAAAGAAAGTCTAGTTCGTGATAAATTAATTGCACGTAAACCAGATTTAGAAGGTTATTACACTGAACATAAAATTTCAACGTATCGTGATGATATTTCCAATACAACGTACTGGATTGCCCACATTCCGAAATATGATAAAGAAGGAAATCAAATTGAAATCAAAGCAGGTCTTGCACCGAAACAATATTTAGACCCACCTAAAACCGTTCGGGAGTTTGCCAATCGTGAAGGCTCAACGCTTGCGATTAATGCCAGTACCTTTTCAGATACTACTTTACGTTTGCATGGTTTATTCATGGTTGACGGAAAAGTGATTGCTGATGGTACAAGTGACCCAGCTAAATACACACTTGCGATTTCAAAAGATGGTAAAATGCGTTCCTATATTCCGAACACATCAGCCGACAGAATTAAAATTGATGGTTACGAAACAGCATTGACGGGTTTCATGCCTTTGATTGAAAACGGTAAAGCAGTAGACCAAAGCATTTTAGATTTGAATACGTCTATTACACAAAATGCACACCCACGAACAGCAGTCGGGCAAAATGCAAACGGTGACACCTTCTTCTTTGTATCAACAGGAAGATTAATGGGTGAATACGGTATGACAGCCAAAGACATGATTCGCGTTATGCTGAAACATGGCTTCACTTTTGCTTTTATGTTAGACGGTGGTGGTTCTAGTTCAATGGTTGAATATGGTTCAGTGGTCAATCGTTTATCAGGTTCGGTTTTAACAGAAAACGGTGGAACAGAAAGACCTGTAGGAAACGTGCTTTATATTAAAAAGGGCGAACCTTCCAAAGAATCAAAAAAATTAATGGAAATTATCGGTGAAAGTGCTTTTCGTTCACATCGTTTCACAATGATGCTTGAAGGTATGCGATTCCTTCCTTCTTCATGGTATGCAATGGAGAAATATTTAGTCAATGGTTGGAAAAACTTTTCGGGAATAGGTTCGAACGCTTGTCGTTTCCATATTCACACCAACAACCAAATTACCATGATGGGAACGATTGCAGGTGGAAGAAGTGGAACGGTCTTTATGCAACTACCACCCGAAATAGCACCAATGTTTACCACCCACCATATAGCAATTGGAAATACTTCGGGAGAAATTTATAAAGTGGTTGTAGCTACAGACGGAACACTAACCGTTTATAACTGGAACCCAAATATTCCAAAAGATATTATCGAATATGTAAAATTAGATGATATTGCTTTTGCGATTAATCCACCTGTACAGGGTAAACCACGCCCACCATTTAAACCTTTAAAGGAGTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
244dc0fa5ad4eec51875e388c4f4e9ad9f30ebf9613b443bb98eaab7278e5733
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,7644
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50