Protein

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Genbank accession
YP_010102556.1 [GenBank]
Protein name
hypothetical protein
RBP type
TF
Evidence UniProt/TrEMBL
Probability 1,00
TF
Evidence Phold
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MTKITVGTPVTAPLTPGRDDTNVWPTHLAKYGAGGLEVVETTSDRDGISDARKTDKAVLVRSDDGGRAALYEWSSGGWNKVDIGDFSGMTITDGANVFNDIVEIKLANMTANQYPNDSVDSVTLTAEGSLDWATMGDPSSGSRATSVLVEPPLQTYPDPDNTGVTRLRVKEGSYEPMKAPGYLAYVDFPEKVIGKLGYHTLGHYDSAIWPTDTVVSGGGLIPTIADKKHIGLQEYDGKDPNKTGGTDFLVAFRVAFKGHAVNAGKIKAYLAKQPAPGTSDSADYLRDVNGELLVREVNYKAGDEYGHIEVLGIVNAKGLINLSMHIEHNFSDSLLIEERAVGLSGVMVQALESKSKTGAALMQYEIDTKQNIEFNKIYYGDSIMDFNWEATHGLPMEEIQAGIGANLPDGFHFKNLSNIHIGSKDDHIYVHDAGTVCDFSLGKIFNAFDTRALHGKEINVKATIIDKDAPFTIGVVKWTGKPDQYTNNIFSSRNSATVVFDAGWELVGSLFFPSESVTGDHTLTKKFTVPSDANNFAVIIYPGVPNSPLTLKIKDFDVDVVNPFYGYEMYVAGKLNELHLEEDTEFAHFSQANENYVSLRYTIGKSADGDPMPVGVLRKGKADITLDPSINKIVGSAATSGEGGLKFGKDGKAIVNTTLWIHSEQPEKTASDVTFWYELVNSHGIATKIIPSETTFKVSGDSSGDYSMKEFSLDVITGDRIVLKASADKDDGAFIQSNSPAHPLVDIEIRIDELTAFANDDPFTGVELDQFDKVYTGVLTATKYVSHTDSATFHIEVPDDMNVSVLEAIKKLDDGTVTTVKSLDWSYNLKSQMLTVYFGEVVEECAITLGIYTA
Physico‐chemical
properties
protein length:854 AA
molecular weight: 92805,78960 Da
isoelectric point:4,80121
aromaticity:0,09133
hydropathy:-0,23829

Domains

Domains [InterPro]
DC_0389
STR
1–854
DC_0389
YP_010102556.1
1 854
Architecture
STR
STR 1-854
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
YP_010102556.1
1 854
Domain Start End Length (AA) Confidence
N-terminal 1 351 351 0,4461
Central domain 352 564 214 0,1746
C-terminal 565 854 289 0,8838
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-351
Central
352-564
C-terminal
565-854

Taxonomy

  Name Taxonomy ID Lineage
Phage Vibrio phage Brizo
[NCBI] 		2590896 Uroviricota > Caudoviricetes > Demerecviridae > Thalassavirus > Thalassavirus brizo
Host Vibrio campbellii ATCC BAA-1116
[NCBI] 		2902295 Pseudomonadota > Gammaproteobacteria > Vibrionales > Vibrionaceae > Vibrio > Vibrio campbellii

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_010102556.1 [NCBI]
Genbank nucleotide accession
NC_055800 [NCBI]
CDS location
range 86182 -> 88746
strand +
CDS
ATGACAAAAATAACAGTTGGTACTCCAGTTACAGCACCTCTTACACCGGGTCGTGATGACACCAATGTTTGGCCAACACATTTAGCCAAGTATGGTGCTGGTGGTTTAGAGGTAGTAGAGACTACCTCTGATAGAGATGGTATTTCAGATGCTAGAAAAACAGATAAAGCTGTACTAGTACGTTCAGACGATGGAGGGCGAGCAGCCCTCTATGAATGGTCTTCAGGTGGTTGGAACAAAGTAGATATCGGCGATTTCTCTGGTATGACAATCACAGATGGAGCTAATGTCTTTAACGATATAGTAGAAATAAAATTAGCTAATATGACAGCTAATCAGTATCCTAACGACTCAGTTGACTCTGTTACACTAACCGCAGAGGGATCTCTAGATTGGGCTACGATGGGTGATCCTTCCTCTGGTAGTAGAGCAACATCAGTATTAGTAGAGCCACCTCTACAAACATACCCAGACCCAGATAATACCGGGGTTACTCGTCTTAGAGTGAAGGAAGGTTCCTATGAGCCAATGAAAGCTCCAGGATACTTAGCTTACGTTGACTTCCCAGAAAAAGTCATCGGTAAGTTGGGCTACCATACTCTAGGTCACTACGATAGTGCTATTTGGCCTACTGATACGGTAGTATCTGGTGGTGGGTTAATTCCTACTATTGCGGACAAAAAGCACATTGGGCTACAAGAGTATGACGGTAAAGACCCTAATAAGACAGGTGGTACAGACTTTTTAGTAGCTTTCCGAGTTGCTTTTAAAGGGCATGCTGTAAACGCAGGTAAAATTAAAGCTTACCTAGCTAAACAACCTGCACCAGGTACATCTGACTCTGCTGATTACCTAAGAGATGTAAACGGTGAGTTACTAGTTCGAGAAGTGAACTATAAAGCCGGAGATGAGTATGGCCATATAGAGGTACTTGGTATTGTTAATGCCAAAGGTCTTATTAACCTGTCCATGCATATTGAGCATAACTTCAGTGATAGCTTACTTATTGAAGAGCGTGCTGTAGGGCTGTCTGGTGTGATGGTACAAGCATTAGAATCTAAGTCTAAAACCGGTGCTGCGTTAATGCAGTATGAAATAGATACTAAACAAAACATTGAGTTTAATAAGATCTATTACGGTGACAGTATTATGGATTTCAATTGGGAAGCTACTCATGGCCTACCAATGGAAGAAATCCAAGCCGGTATAGGGGCAAACCTGCCTGATGGTTTTCACTTTAAAAACCTGTCAAACATCCATATCGGTAGTAAAGATGACCACATCTATGTACACGATGCTGGTACAGTGTGTGACTTCAGTCTAGGTAAAATCTTTAATGCCTTCGATACTAGAGCATTGCACGGTAAAGAAATAAACGTTAAAGCTACGATTATAGACAAAGATGCACCATTTACTATTGGTGTAGTTAAATGGACAGGAAAACCAGACCAATACACTAATAACATCTTCTCTAGCAGAAACAGTGCAACGGTTGTATTTGACGCTGGCTGGGAACTAGTAGGTTCGCTATTCTTCCCTTCAGAATCTGTAACAGGTGATCATACACTAACTAAGAAGTTTACAGTTCCTTCGGATGCTAATAACTTTGCAGTTATTATTTATCCTGGCGTGCCTAACTCCCCGCTTACACTGAAGATTAAGGACTTTGATGTTGATGTAGTTAATCCTTTCTATGGTTACGAAATGTATGTAGCAGGAAAACTTAACGAGCTACACCTAGAAGAAGACACTGAGTTTGCACACTTCAGTCAAGCTAACGAGAACTATGTATCTCTACGCTATACAATAGGTAAGTCAGCAGATGGTGACCCAATGCCTGTTGGTGTTTTGAGAAAAGGTAAAGCTGATATTACTCTAGACCCATCAATCAATAAAATTGTTGGTTCAGCTGCTACTAGCGGTGAAGGTGGTCTTAAATTCGGAAAAGATGGTAAAGCTATTGTTAATACCACTTTATGGATTCATTCAGAGCAACCTGAAAAGACTGCGTCAGACGTTACATTCTGGTATGAGTTAGTTAACTCTCACGGCATCGCTACTAAGATTATTCCATCAGAAACTACCTTTAAGGTTAGTGGTGACTCTTCAGGGGACTACTCAATGAAAGAGTTTTCACTTGATGTAATAACTGGCGATAGAATCGTTCTTAAAGCTTCTGCTGATAAGGATGATGGTGCATTTATTCAATCCAACTCACCAGCACACCCACTGGTTGATATTGAGATTAGAATTGATGAGTTAACCGCTTTTGCTAATGACGACCCATTTACAGGTGTAGAGCTAGATCAATTTGATAAAGTATACACCGGAGTACTTACAGCTACTAAATATGTATCACATACTGACTCAGCTACCTTCCATATTGAGGTACCAGATGATATGAATGTGTCAGTGCTAGAAGCTATTAAGAAACTAGATGATGGCACTGTAACAACAGTGAAAAGCCTAGACTGGTCTTACAACTTGAAATCACAAATGCTAACAGTGTATTTTGGTGAAGTTGTAGAGGAATGTGCTATTACTCTAGGTATTTATACAGCATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
86ec78a717202402ef6e91be3b9eef68f6540ae45f988294e780f0e292f31449
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,4653
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50