Protein

View in Explore
Genbank accession
AIK68527.1 [GenBank]
Protein name
putative tail fiber protein
RBP type
TF
Evidence RBPdetect
Probability 0,91
TF
Evidence RBPdetect2
Probability 0,94
Protein sequence
MTTPILSFVVYDGDGSTLDYTFDFGYLDRNHIKAYIDDVASGDFTWTGPFSLRFNTAPAVDTKVRIARETPSAAPLVTIANGSSLRAEDLNRQALQSMYVSQESADIAVLMKSGTLSAPVTDAGRVILQFPSIEERRNGVLGFDADGQFRPFTSADMPKGETGDKGATGDQGPIGPQGPQGPVGPQGIEGPAGANYSPDAQGLTSGRAAYDAQATGFSYLDIEVGQLFWKLSATSGDWSAGIAFGAGAQGVQGIQGPEGPAGAQGPAGATGPAGTPGMIWRGAYAGATAYTPKDVVSYAGAAYINTVASTGNLPTNTSYWNLVAAKGDQGVQGVQGPVGPAGPQGNVGPQGPTGSNATGSKYRSYSSSATWTKPAGLVGVLIRIRGASGGGGGAVSGNGSGRGGIGGSASEATRYVPEASLGATETITIGAKGTAGAAGNNAGGAGGTTSFGSLLVATGGGGGGGSSGNGVTGTGGTRGDITSAWDTRPYTIDTSLTPVNAANEPGTPATPGSGNGGRGGGNDNGSRPGGVGDTGFIEIWEFYN
Physico‐chemical
properties
protein length:544 AA
molecular weight: 53967,24440 Da
isoelectric point:4,73028
aromaticity:0,07721
hydropathy:-0,26618

Domains

Domains [InterPro]
IPR005604
ATT
1–107
IPR005604 IPR050149
DC_1263
ATT
1–147
DC_1263 DC_0876
G3DSA:1.20.5.320
STR
247–308
G3DSA:1.20.5.320 G3DSA:1.20.5.320
AIK68527.1
1 544
Architecture
ATT
STR
ATT 1-147 | STR 235-431 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Mesorhizobium phage vB_MloP_Lo5R7ANS
[NCBI] 		1527771 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Mesorhizobium loti
[NCBI] 		381 Bacteria > Proteobacteria > Alphaproteobacteria > Rhizobiales > Phyllobacteriaceae > Mesorhizobium

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AIK68527.1 [NCBI]
Genbank nucleotide accession
KM199771 [NCBI]
CDS location
range 39139 -> 40773
strand +
CDS
ATGACCACACCAATTCTATCCTTCGTCGTCTACGACGGGGACGGGTCGACGCTCGACTACACGTTCGACTTCGGCTACCTCGACCGCAACCATATCAAGGCGTACATCGACGACGTTGCCTCGGGTGACTTCACTTGGACCGGGCCGTTCTCGCTCCGCTTCAACACGGCACCAGCAGTCGACACGAAGGTCCGCATCGCCCGCGAGACGCCTTCGGCTGCACCGCTGGTGACCATTGCGAACGGCTCCTCGCTGCGAGCTGAGGACCTCAACAGGCAGGCCCTGCAGTCCATGTACGTCAGCCAAGAGAGTGCTGACATCGCGGTTCTGATGAAGTCTGGAACGCTCTCGGCTCCCGTCACGGATGCCGGTCGTGTCATCCTCCAGTTTCCAAGCATCGAAGAGCGCCGAAATGGCGTTCTGGGCTTTGACGCCGATGGCCAGTTCCGCCCCTTCACGTCAGCCGACATGCCCAAAGGCGAGACCGGCGACAAGGGTGCGACCGGCGATCAGGGGCCAATTGGTCCTCAGGGTCCGCAAGGTCCTGTAGGTCCGCAAGGCATCGAAGGTCCGGCTGGCGCTAACTACTCCCCTGACGCTCAGGGATTGACCTCTGGCCGTGCAGCCTACGACGCGCAGGCGACTGGCTTCTCCTACCTCGACATTGAGGTTGGTCAGCTCTTCTGGAAGCTGAGCGCGACCTCCGGCGATTGGTCCGCAGGAATCGCCTTTGGTGCCGGCGCACAGGGCGTCCAAGGCATACAAGGCCCGGAAGGCCCGGCTGGAGCCCAAGGCCCGGCAGGTGCCACAGGACCCGCAGGTACCCCGGGGATGATCTGGCGTGGCGCTTATGCAGGCGCTACGGCCTACACCCCTAAGGATGTCGTCTCGTACGCCGGGGCGGCATACATCAACACCGTCGCCTCGACGGGCAACCTTCCGACCAACACGAGCTACTGGAACCTCGTCGCCGCTAAGGGCGATCAGGGCGTACAAGGCGTCCAAGGTCCGGTCGGCCCCGCTGGTCCTCAGGGCAATGTCGGTCCACAAGGCCCGACCGGCTCCAACGCTACGGGCTCCAAATACCGTTCCTACTCCTCGTCCGCGACCTGGACAAAGCCTGCCGGATTGGTGGGAGTTCTGATCAGGATCAGAGGCGCGTCCGGTGGCGGTGGCGGGGCTGTAAGCGGCAACGGCAGTGGTCGTGGGGGTATCGGAGGTTCAGCCAGTGAGGCCACTCGGTATGTCCCTGAGGCGTCTCTTGGGGCTACGGAAACCATCACCATAGGGGCGAAGGGCACCGCAGGAGCAGCCGGCAACAACGCTGGTGGCGCAGGTGGCACCACATCCTTTGGTTCGCTTCTGGTGGCGACGGGAGGCGGAGGCGGTGGGGGCTCTTCCGGAAACGGCGTTACTGGCACCGGAGGCACCCGGGGAGACATCACGTCTGCGTGGGACACAAGGCCCTATACTATTGACACCTCCCTCACGCCGGTGAACGCGGCGAACGAGCCTGGCACTCCCGCCACACCGGGATCAGGCAACGGTGGACGCGGTGGGGGCAACGATAACGGCTCCCGCCCCGGCGGCGTCGGTGACACCGGCTTTATCGAAATTTGGGAGTTCTACAACTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
de2ea86b5a8209bb77b31aa0b7ce03007461f36960485a5aa36308902c365b82
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7938
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Genomic characterization of two T7-like Mesorhizobium loti phages vB_MloP_Lo5R7ANS and vB_MloP_Cp1R7ANS-C2 Halmillawewa,A.P., Perry,B., Gavard,R., Yost,C.K. and Hynes,M.F. 2021-02 — GenBank