Protein

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Genbank accession
YP_009844344.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
Protein sequence
MFVYIKFDENGYITDFKKEPEDGYTKSFVLNKDIKNFVKFSDKFRWDTDSQAIITPSNLPKTVEYEDAMNQINSLSTTINSLTNVMIGGI
Physico‐chemical
properties
protein length:90 AA
molecular weight: 10372,59010 Da
isoelectric point:4,76029
aromaticity:0,13333
hydropathy:-0,42444

Domains

Domains [InterPro]
DC_2232
STR
1–90
DC_2232
Coil
Unmapped
65–85
Coil
YP_009844344.1
1 90
Architecture
STR
STR 1-90
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Lactobacillus phage SAC12B
[NCBI] 		2510941 Uroviricota > Caudoviricetes > Herelleviridae > Tybeckvirus SAC12B >
Host Lactobacillus brevis
[NCBI] 		1580 cellular organisms > Bacteria > Bacillati > Bacillota > Bacilli > Lactobacillales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_009844344.1 [NCBI]
Genbank nucleotide accession
NC_048754.1 [NCBI]
CDS location
range 135042 -> 135314
strand +
CDS
TTGTTTGTATATATTAAGTTCGATGAAAATGGGTATATTACTGATTTTAAGAAAGAACCAGAAGATGGCTATACAAAATCATTTGTATTAAATAAAGATATTAAAAATTTTGTAAAGTTTAGCGATAAATTTAGATGGGATACAGATAGCCAAGCGATTATTACCCCAAGTAATCTTCCTAAGACAGTAGAATATGAAGATGCTATGAATCAGATTAACTCATTAAGTACAACGATTAATAGTTTAACTAATGTTATGATTGGAGGAATTTAG

Genome Context

Genome Context

Tertiary structure

PDB ID
7a028c58a2a9e61499d241b2b9016c20fcadb30330f912e5db6440e583c914eb
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,8349
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Isolation of virulent Lactobacillus brevis phages Feyereisen,M., Mahony,J., O'Sullivan,T. and van Sinderen,D. 2019-04-26 — GenBank