Protein

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Genbank accession
BFM93440.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TF
Evidence RBPdetect
Probability 0,61
Protein sequence
MAPGKLIQEFNDKLHINGHVYRTSDLSELVGKTAIPANNYYRANGGTSVWSMRLKRGYQPQTRNANLNAGTPHTQLDDMDVALCGNWAGVTTSGLWLDSTRFRQMLAASSDNLVIDADTETGVITNSENAFVTGINGGNELTAWLPPGPGGWIGMLRYSNANGGCSALESYPAGSVTAGTTGLVIGSHTPIGTAIQYHYRINDENLRWYFLGINASSSQQATQIAVHAVLKSTLALTTINAGMAVPAGAGAVGAIGLGYANSAPSYAYASDVNELSSYVLWRTSGTMEIHRVQISGVNGTPTVSNNLVTLDQNPMTLQGTTGTPTAARIVLVSHTDGNKYLLVFGLEPYGNVPNGATATMYVYKLSDKNTAQYLGTYQLAPGPRSFLGSDDSNMRFVMVYDDRYEFWSMGAAGVLSKVDSVYVQRNNASQWWEAEPYGFDSTGRFWYITPDSAKPTVFCELGLNFYSPPGQVNTISVSFDSNNYNFTGGPVQGNLSVAVKDINGAFIAATVNLSPTANMTLSSSQIQTTTAGPTLVPFTITGPGDLSVDAWT
Physico‐chemical
properties
protein length:552 AA
molecular weight: 58930,04050 Da
isoelectric point:5,26519
aromaticity:0,09783
hydropathy:-0,14112

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
BFM93440.1
1 552
Domain Start End Length (AA) Confidence
N-terminal 1 64 64 0,4916
Central domain 65 280 217 0,4073
C-terminal 281 552 271 0,4114
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-64
Central
65-280
C-terminal
281-552

Taxonomy

  Name Taxonomy ID Lineage
Phage Ralstonia phage FLC1-1B
[NCBI] 		3157661 No lineage information
Host Ralstonia pseudosolanacearum
[NCBI] 		1310165 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Betaproteobacteria > Burkholderiales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
BFM93440.1 [NCBI]
Genbank nucleotide accession
LC819005 [NCBI]
CDS location
range 153587 -> 155245
strand -
CDS
ATGGCGCCAGGTAAGCTCATCCAGGAGTTTAACGACAAGCTCCACATCAACGGCCACGTCTACCGGACCAGCGACTTGAGTGAGCTGGTGGGTAAGACCGCGATTCCGGCTAACAACTACTACCGTGCGAATGGCGGGACCTCCGTCTGGTCGATGCGTCTGAAACGCGGCTATCAGCCCCAGACTCGCAACGCCAACCTTAATGCTGGCACGCCTCACACCCAGCTGGATGACATGGATGTCGCGCTATGCGGTAACTGGGCGGGCGTGACAACATCGGGTCTGTGGCTCGACTCGACGCGCTTTCGTCAGATGCTGGCTGCTAGCTCGGATAACCTCGTGATCGACGCGGATACCGAAACAGGTGTGATTACCAATTCAGAAAACGCGTTTGTCACTGGCATCAACGGCGGTAACGAACTGACTGCCTGGCTGCCACCCGGGCCAGGTGGCTGGATTGGCATGTTGCGTTATAGCAATGCCAACGGCGGCTGCTCTGCACTCGAATCCTATCCGGCCGGTTCAGTCACAGCGGGCACCACCGGCTTAGTGATCGGTAGCCACACGCCGATTGGCACCGCAATCCAGTATCACTACCGGATCAATGATGAGAACCTGCGCTGGTACTTCCTGGGTATCAATGCCAGTTCGTCTCAGCAGGCAACGCAGATCGCAGTCCACGCTGTGTTGAAATCGACGCTGGCGCTCACGACGATCAATGCGGGTATGGCTGTGCCGGCAGGCGCGGGTGCGGTTGGAGCGATTGGTCTTGGCTACGCTAACTCAGCCCCGTCGTATGCTTACGCCAGCGACGTCAACGAGTTGTCCAGCTACGTGCTGTGGCGTACGTCCGGGACCATGGAAATCCACCGGGTGCAGATCAGCGGGGTGAACGGTACACCGACGGTCAGCAACAACCTGGTGACGCTGGACCAGAACCCGATGACGCTACAAGGCACGACCGGTACGCCGACGGCTGCACGTATCGTGCTCGTCAGTCACACGGACGGCAACAAGTACCTGTTGGTGTTTGGTCTGGAGCCCTACGGCAACGTGCCGAACGGTGCGACCGCGACGATGTACGTCTACAAACTCAGCGACAAGAACACGGCCCAGTATCTCGGCACGTATCAGCTGGCGCCGGGTCCGCGTTCATTCCTGGGTTCGGACGATTCGAACATGCGTTTCGTGATGGTCTACGACGATCGTTACGAATTCTGGTCGATGGGTGCAGCAGGCGTGTTGTCGAAGGTCGACAGCGTCTACGTGCAACGCAACAACGCAAGCCAGTGGTGGGAAGCGGAGCCGTACGGGTTCGACAGCACCGGGCGCTTCTGGTACATCACACCGGACTCAGCCAAGCCCACGGTCTTCTGTGAGCTGGGGTTGAACTTCTACTCGCCGCCGGGTCAGGTCAACACGATCTCCGTGTCGTTCGACAGCAACAACTACAACTTCACGGGTGGTCCGGTACAGGGCAACCTGTCGGTAGCGGTGAAGGACATCAACGGTGCGTTTATCGCGGCCACAGTGAACCTCTCGCCGACAGCGAATATGACGCTCTCGTCCTCGCAGATCCAGACGACGACTGCCGGTCCGACGCTGGTGCCGTTCACGATCACGGGTCCTGGTGATCTCTCGGTGGATGCCTGGACATGA

Genome Context

Genome Context

Tertiary structure

PDB ID
4417899df2236e76ddb682f0fed1dbdc20d9faa3e7527ebe319211933027a9d2
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,5442
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Complete genomic sequences of novel Ralstonia jumbophages isolated from leaf litter compost Sasaki,R., Miyashita,S., Ando,S. and Takahashi,H. 2024-08-09 — GenBank