Protein

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Genbank accession
XLQ29637.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
Protein sequence
MKLTTEQKVAIREILKTKLSMGVSNIVFEKSDGTIRTMKGTRDADFMPTMQTGKLTESTRKESTDMVPVFDVELGAWRGFSIDKLISVNGMKVEHLLQFIGK
Physico‐chemical
properties
protein length:102 AA
molecular weight: 11469,31500 Da
isoelectric point:9,34522
aromaticity:0,05882
hydropathy:-0,23529

Domains

Domains [InterPro]
IPR024401
STR
13–86
IPR024401
XLQ29637.1
1 102
Architecture
STR
STR 13-86 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Escherichia phage Ec_YwIITB1
[NCBI] 		3366621 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Escherichia coli
[NCBI] 		562 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XLQ29637.1 [NCBI]
Genbank nucleotide accession
PQ356294.1 [NCBI]
CDS location
range 134646 -> 134954
strand -
CDS
ATGAAACTGACAACTGAACAGAAAGTAGCAATTCGTGAAATTTTGAAAACTAAATTGTCCATGGGTGTTTCAAACATAGTTTTTGAAAAGTCTGATGGTACTATTCGTACTATGAAAGGTACTCGTGATGCCGATTTTATGCCAACCATGCAAACCGGTAAATTGACTGAATCTACTCGGAAAGAATCTACTGATATGGTTCCAGTATTTGATGTTGAGCTTGGTGCATGGCGAGGTTTTTCTATTGACAAATTGATTTCCGTTAATGGTATGAAAGTTGAGCATTTGCTTCAATTTATTGGTAAATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
92ca99499be722d62d9d3d8369b9a8b158222d3e33e4c9c5d339257f275b3094
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8460
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Escherichia coli genome Wangchuk,J., Chatterjee,A., Khan,R. and Kondabagil,K. 2021-07-12 — GenBank