Protein

View in Explore
Genbank accession
WWD13088.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TF
Evidence RBPdetect
Probability 0,84
TF
Evidence RBPdetect2
Probability 0,93
Protein sequence
MVTKTVIPTDITKLKNESLNKNNNLSDLADRAAAWLNVRPIGSTPLAGDPVNDYDAVTKRWVENKINTGTVGPTMNGVMNYGVGDFHLRDSRAYIQPYEVVSDGQLLNRADWPELWAYAQMVGAIEDSEWLADKFQRGKYSKGNGTTTFRVPDKNGVQDGSIRALYGRGDGGNSNANGQLFESAAPNIYGRIASYSGSSYAQVFSDINQGAFRTSNDLYPAAAGDAIPMTGAISISGRYNTLEIDASRSSPIYGASNDEILTRNFVGVWVIRASGGFVAAKTSWSVINADAVKPSASTTVYGGSVLSEYKVGTSSEAISTLRAKATIDGNYSTELLIDNKSTGKSSSAQLVDTGNFVADRFEANLVTGMAWSQTGWVQGTFSQSEANIGSTFNFNSILSGSQYSTAGYKTSAHFGLIHNDLGSFADSCWHVSGDADNKFGVRLKIQPNNNSIYFYSWWPGASATYTLQLNAVSDSRLKHDIKAIDATKSIEVLKGLEFQSFVYNNDEKSRVRRGVIAQQVETIEPLYVKTRKFYNDDGIEQEQKELDTTPMLLDTMHVVQDLIKRIEDLEKELEQLKVQLVSQ
Physico‐chemical
properties
protein length:583 AA
molecular weight: 63754,03850 Da
isoelectric point:5,31970
aromaticity:0,09605
hydropathy:-0,38045

Domains

Domains [InterPro]
Coil
Unmapped
11–31
Coil IPR030392 Coil
DC_1514
STR
13–583
DC_1514
IPR030392
CHP
473–573
IPR030392
WWD13088.1
1 583
Architecture
STR
STR 13-583
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
WWD13088.1
1 583
Domain Start End Length (AA) Confidence
N-terminal 1 290 290 0,3558
Central domain 291 489 200 0,1412
C-terminal 490 583 93 0,9980
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-290
Central
291-489
C-terminal
490-583

Taxonomy

  Name Taxonomy ID Lineage
Phage Escherichia phage Baret
[NCBI] 		3098283 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Escherichia coli
[NCBI] 		562 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
WWD13088.1 [NCBI]
Genbank nucleotide accession
OR896834.1 [NCBI]
CDS location
range 23088 -> 24839
strand +
CDS
ATGGTAACTAAAACAGTAATTCCTACGGATATTACAAAACTTAAAAATGAGTCACTTAATAAAAATAATAACCTGAGTGACTTAGCAGACCGTGCAGCAGCATGGCTAAATGTACGTCCTATTGGATCTACTCCCCTTGCGGGAGACCCCGTTAATGATTATGATGCTGTAACTAAGCGTTGGGTAGAAAATAAGATTAATACTGGCACAGTAGGACCCACAATGAATGGTGTCATGAACTATGGTGTAGGTGATTTTCACCTTCGCGATAGCCGTGCGTATATTCAACCTTATGAGGTAGTTTCTGATGGGCAGCTTCTTAACAGGGCTGACTGGCCGGAGCTTTGGGCTTACGCTCAAATGGTGGGGGCTATAGAGGATTCTGAATGGCTGGCTGATAAATTTCAGCGCGGCAAATACTCTAAAGGGAATGGAACAACAACCTTTCGTGTTCCAGATAAGAATGGTGTACAAGATGGGTCAATACGCGCTCTTTATGGCCGCGGAGATGGTGGGAATAGCAATGCAAATGGGCAACTGTTCGAATCCGCTGCGCCTAATATCTATGGGCGTATTGCTAGTTATTCTGGCTCGTCATATGCTCAGGTATTCAGCGATATCAATCAAGGTGCATTTAGAACAAGTAATGATCTATACCCTGCTGCGGCAGGTGATGCAATCCCGATGACGGGTGCAATTTCAATATCTGGGCGCTACAACACCCTTGAGATTGATGCGTCACGCTCAAGCCCGATCTACGGGGCATCAAATGACGAAATCCTTACACGAAACTTTGTCGGCGTCTGGGTGATTCGTGCATCTGGTGGATTTGTTGCTGCGAAGACATCATGGAGTGTGATAAACGCTGATGCTGTTAAACCTTCTGCTAGTACTACTGTTTATGGCGGAAGTGTACTATCTGAATATAAAGTAGGTACTAGCAGTGAAGCTATAAGTACATTACGTGCTAAAGCTACTATTGATGGCAACTACTCTACTGAGCTACTAATAGATAATAAATCTACTGGTAAATCGAGTTCCGCCCAGCTTGTAGATACTGGGAATTTTGTAGCGGATCGTTTTGAAGCTAATCTAGTAACTGGTATGGCGTGGTCTCAGACGGGCTGGGTACAAGGTACTTTTTCTCAGAGCGAAGCGAATATAGGCAGTACATTTAATTTTAATAGTATTTTGAGTGGTTCCCAGTATTCTACTGCGGGGTATAAAACATCTGCACATTTTGGATTAATTCATAATGACTTGGGTTCCTTTGCTGATTCTTGCTGGCATGTATCAGGAGATGCGGATAACAAATTTGGTGTACGTTTAAAAATTCAACCAAACAATAATAGTATTTATTTCTATTCTTGGTGGCCAGGTGCTTCAGCAACCTATACTTTGCAATTAAATGCTGTATCTGATTCTCGCTTAAAGCATGATATTAAGGCTATAGACGCAACTAAGTCCATCGAGGTATTAAAAGGATTAGAATTCCAATCCTTTGTATATAATAACGATGAAAAATCTCGTGTCCGACGTGGGGTTATTGCTCAGCAAGTAGAGACTATAGAACCACTTTATGTAAAAACTAGAAAATTTTATAATGATGACGGAATAGAGCAGGAGCAAAAGGAATTAGATACAACTCCAATGCTTCTTGACACTATGCATGTTGTGCAAGATCTTATTAAACGGATTGAAGATCTAGAGAAAGAGCTTGAGCAATTAAAGGTACAATTAGTATCACAATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
401f9a530c9a31ffcf4c5a7987043d7616fdccfcb6e03ef84a32d063a39772de
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6782
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50