Protein

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Genbank accession
ASV41652.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
Protein sequence
MANWSNITPENSNEKDDEFIIRHQGINYLQKRDVVAASMSNARWLAEGNYLAGSEVKGSDNIWYTAVVNTGSDYGNSTNPVTKVDDSVWVQKVYEVTPLNDDWNGFFTRNHITQLPSPAGVPATSGSGGTVYGADDEWSIGNFTTGGVISLDNDGLVFSQGIYKLFTFTVEQLSLIDVTKVPVYIVGQDGSRHFVKHNGTGVVVTKPNTTTLKVQVNNAILAELGITKVFSFFVTATVGFVQEKGDLALPSSLGFFEIEGLPQENGFIITNMTLGGKRVIIQNVTFGPITNGGSATVPWITPFPNAVFNCVASPLGLGANAASSSVATGNPTVNGVNVYNWGTIQAKVRIFAIGY
Physico‐chemical
properties
protein length:355 AA
molecular weight: 38063,19870 Da
isoelectric point:5,01260
aromaticity:0,10423
hydropathy:-0,01127

Domains

Domains [InterPro]
DC_0226
STR
1–354
DC_0226
G3DSA:2.60.40.3940
RBD
262–355
G3DSA:2.60.40.3940
ASV41652.1
1 355
Architecture
STR
STR 1-355
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
ASV41652.1
1 355
Domain Start End Length (AA) Confidence
N-terminal 1 133 133 0,9668
Central domain 134 332 200 0,0975
C-terminal 333 355 22 0,9986
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-133
Central
134-332
C-terminal
333-355

Taxonomy

  Name Taxonomy ID Lineage
Phage Vibrio phage JSF1
[NCBI] 		1983592 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Vibrio cholerae
[NCBI] 		666 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Vibrionales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
ASV41652.1 [NCBI]
Genbank nucleotide accession
KY883636.1 [NCBI]
CDS location
range 12198 -> 13265
strand +
CDS
ATGGCAAACTGGTCAAATATTACACCAGAGAATAGTAATGAAAAAGATGATGAGTTTATTATTCGTCACCAAGGTATCAACTACTTACAGAAACGAGATGTAGTTGCTGCTAGTATGAGCAATGCACGTTGGCTTGCTGAAGGTAACTATTTAGCTGGAAGTGAAGTAAAGGGTAGTGATAATATTTGGTATACTGCGGTCGTAAACACAGGTAGTGATTACGGGAACAGTACCAACCCTGTAACTAAGGTTGATGATTCGGTATGGGTACAAAAAGTATATGAAGTCACCCCCCTAAACGATGACTGGAACGGTTTCTTCACAAGAAACCACATAACTCAACTACCATCACCTGCAGGAGTACCAGCTACCAGTGGTTCTGGGGGTACTGTATATGGTGCTGATGACGAGTGGTCTATTGGAAACTTCACCACAGGTGGGGTTATTTCGCTTGATAATGATGGTCTTGTATTTTCTCAAGGAATCTACAAACTATTCACGTTCACTGTTGAGCAGTTGTCCCTTATTGATGTCACCAAAGTTCCGGTCTATATCGTTGGTCAAGATGGTTCGCGGCACTTTGTTAAACACAACGGAACGGGTGTGGTTGTCACAAAGCCAAATACCACAACTCTAAAAGTGCAGGTTAACAATGCAATTCTTGCCGAGCTTGGTATTACGAAAGTGTTTAGTTTTTTTGTGACTGCTACGGTTGGTTTCGTTCAAGAAAAAGGTGATCTTGCTCTACCGTCTTCGCTTGGATTTTTTGAGATCGAGGGTCTTCCTCAAGAAAACGGCTTTATCATCACAAATATGACTCTTGGGGGGAAGAGGGTAATCATACAAAACGTAACCTTCGGACCAATTACCAATGGGGGTAGTGCAACTGTACCATGGATTACCCCGTTCCCTAATGCGGTTTTCAACTGCGTAGCTTCACCACTAGGTCTGGGAGCAAACGCGGCCTCTTCGTCGGTGGCCACAGGTAACCCTACTGTTAATGGAGTTAACGTATACAACTGGGGTACAATACAAGCTAAAGTAAGAATATTTGCGATAGGTTATTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
cc556cb07fcba846ff7a1e224c0d3ddd22c8ec61c7666b6556a3a3ad6950b2d5
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6482
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50