Protein

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Genbank accession
YP_010078053.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
Protein sequence
MTTVTIEDIVFDGIPSSDIDVEGVTSVDDSGAWDAPEQAVEKGFDYSSYNQPEPITASFEAWATPEHRATLVELRDATEPFAASVDQLVLGSAKLTQLDTNREVSSASHYRVTVEFEEVREAELETAEMSVESDSGDLSSSSEDADVSYEQPEEDDTGTSEETTDDGGIVGALSSVREGLSGVL
Physico‐chemical
properties
protein length:184 AA
molecular weight: 19709,71130 Da
isoelectric point:4,05003
aromaticity:0,05978
hydropathy:-0,44620

Domains

Domains [InterPro]
DC_0601
STR
2–182
DC_0601
IPR048494
ATT
24–128
IPR048494
YP_010078053.1
1 184
Architecture
STR
ATT
STR
STR 2-23 | ATT 24-128 | STR 129-182 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Natrialba phage PhiCh1
[NCBI] 		114777 Uroviricota > Caudoviricetes > Vertoviridae > Myohalovirus alkaliphilum > Myohalovirus phiCh1
Host Natrialba magadii ATCC 43099
[NCBI] 		547559 Methanobacteriota > Halobacteria > Halobacteriales > Natrialbaceae > Natrialba > Natrialba magadii

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_010078053.1 [NCBI]
Genbank nucleotide accession
NC_054954.1 [NCBI]
CDS location
range 17497 -> 18051
strand +
CDS
ATGACCACAGTCACCATCGAAGACATCGTGTTTGACGGCATCCCGTCGTCGGATATCGATGTTGAAGGCGTCACGAGCGTCGACGACAGCGGAGCGTGGGACGCACCAGAGCAGGCGGTTGAAAAAGGGTTTGACTACTCGTCGTACAATCAACCCGAACCGATCACAGCATCGTTCGAGGCCTGGGCGACACCCGAGCACAGGGCGACGCTGGTCGAGCTTCGAGACGCTACTGAGCCGTTCGCGGCATCAGTCGATCAGCTCGTCCTCGGCTCCGCGAAACTGACTCAGTTGGACACGAACCGAGAGGTGAGTTCGGCGTCTCACTACCGCGTCACAGTAGAGTTTGAAGAGGTCCGAGAAGCCGAGCTCGAGACGGCCGAGATGTCGGTCGAATCGGACTCTGGTGACCTTTCGAGCTCGTCTGAAGACGCCGACGTGTCGTACGAACAGCCTGAAGAAGATGACACCGGGACGTCCGAAGAAACAACCGATGACGGCGGAATCGTCGGCGCGCTGTCGAGCGTTCGTGAAGGTCTCTCGGGGGTGCTGTAG

Genome Context

Genome Context

Tertiary structure

PDB ID
b19ea0d7ba0b4fe8fb50cfb5dfc661ee3ef7b50ad6903bb21eb9351c1814be50
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7109
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Halobacterium salinarum virus ChaoS9, a Novel Halovirus Related to PhiH1 and PhiCh1 Dyall-Smith,M., Palm,P., Wanner,G., Witte,A., Oesterhelt,D. and Pfeiffer,F. 2019 — GenBank
Characterization of Natronobacterium magadii phage phi Ch1, a unique archaeal phage containing DNA and RNA Witte,A., Baranyi,U., Klein,R., Sulzner,M., Luo,C., Wanner,G., Kruger,D.H. and Lubitz,W. 1997 9044293 GenBank