Protein

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Genbank accession
YP_007112299.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence UniProt/TrEMBL
Probability 1,00
TF
Evidence RBPdetect
Probability 0,74
TF
Evidence RBPdetect2
Probability 0,96
Protein sequence
MLYNTGTIAINGNSATGTGTNWTAPASQVRAGQTIIVMSNPVQLFQISSVNSATSMTVTPAASPALSGQKYGILVTDSLSVDGLAQSMSQLINEYDENIGAWETFATTSANQNITVTINGARVTIPAIGKLVQKGSNGAVGVSDGGTGATNAADARTNLGLVKQTSIDDGTPGRLLTTEYSFGLGPAPRSTYPMGQGTQFLIYASTPSNGETPDSSLGCGVQVAYDSTRRAQYFIKTNGYFYSRFSLTSGILDASTAWNMHYTTKNTTKSSDGTLKAASPVARIVASQEACQRSDITEDGFSWCGCGTANAEAEGISISRLDVGVYTLTGSAGLASSGWQLLPPMDPGGMGELGVVEAEQAESGDLTIRLYKRKYILSDEGEIVKTKGELMDVPANSWIDVRLDMPESSAWNQRQKEAAEPAS
Physico‐chemical
properties
protein length:423 AA
molecular weight: 44381,82350 Da
isoelectric point:4,72994
aromaticity:0,06856
hydropathy:-0,21513

Domains

Domains [InterPro]
DC_0709
STR
1–423
DC_0709
IPR058008
RBD
266–407
IPR058008
YP_007112299.1
1 423
Architecture
STR
STR 1-423
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Escherichia phage HK633
[NCBI] 		1147147 Uroviricota > Caudoviricetes > Hendrixvirinae > Saikungvirus HK633 >
Host Escherichia coli
[NCBI] 		562 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_007112299.1 [NCBI]
Genbank nucleotide accession
NC_019719 [NCBI]
CDS location
range 19389 -> 20660
strand +
CDS
ATGCTTTATAACACTGGAACCATCGCCATTAACGGAAACAGCGCCACCGGCACGGGCACGAACTGGACGGCACCCGCCAGCCAGGTTCGCGCTGGCCAGACGATTATCGTGATGTCTAACCCGGTGCAGCTGTTTCAGATTTCATCCGTGAACAGCGCCACGTCAATGACGGTTACTCCAGCTGCTTCCCCGGCGCTGAGCGGCCAGAAGTACGGCATTCTTGTTACTGATAGTCTCTCGGTTGATGGCCTGGCGCAGAGCATGTCTCAGCTCATCAACGAGTATGACGAGAACATCGGCGCCTGGGAGACATTTGCCACCACCTCAGCAAATCAGAACATCACCGTTACCATCAACGGCGCTCGTGTAACCATTCCGGCGATCGGCAAACTGGTCCAGAAAGGGAGCAATGGGGCGGTTGGAGTTTCGGACGGCGGGACCGGGGCAACGAATGCCGCTGACGCTCGCACAAACCTCGGTTTGGTTAAACAGACTTCTATTGATGACGGCACACCGGGTCGATTACTTACTACCGAGTATTCCTTCGGGCTAGGACCAGCGCCCAGATCAACATATCCAATGGGTCAGGGAACACAGTTTTTGATTTATGCATCAACACCCAGCAACGGAGAGACTCCGGATTCTTCACTCGGTTGCGGCGTGCAGGTCGCATACGATTCTACAAGAAGGGCTCAATATTTCATAAAAACTAATGGATATTTTTATAGTCGGTTTTCACTAACATCAGGAATTCTTGATGCATCCACTGCGTGGAATATGCACTATACAACCAAGAATACTACTAAATCTAGCGATGGAACCCTTAAGGCTGCGTCTCCGGTTGCCCGTATTGTAGCGAGCCAAGAAGCCTGCCAGCGCTCAGATATAACTGAGGATGGTTTCTCCTGGTGCGGCTGCGGTACGGCGAATGCAGAAGCTGAAGGTATCAGCATATCTCGTCTTGATGTAGGTGTTTATACGCTTACCGGTTCAGCAGGCCTGGCTTCTTCTGGCTGGCAACTCTTACCACCTATGGATCCTGGTGGTATGGGGGAGCTAGGTGTCGTTGAGGCAGAGCAAGCCGAAAGCGGCGACCTGACGATTCGCCTGTATAAACGCAAATATATCCTAAGCGATGAAGGTGAGATCGTCAAAACCAAAGGTGAATTGATGGACGTGCCGGCGAACAGTTGGATCGATGTGCGTCTCGATATGCCTGAAAGCAGTGCCTGGAATCAGCGTCAGAAAGAGGCGGCTGAGCCTGCTTCGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
274fd080c8b0e809518667b718b196b78bbce97f107acfd085397cb54fb0148f
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8193
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
The genomes of several lambdoid coliphages Refardt,D., Gencoglu,M., Kunzli-Gontarczyk,M., Bruggmann,R. and Kropinski,A.M. 2012-04 — GenBank