Protein

View in Explore
Genbank accession
YP_009148815.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence UniProt/TrEMBL
Probability 1,00
TF
Evidence GenBank
Probability 1,00
TF
Evidence Phold
Probability 1,00
TF
Evidence RBPdetect
Probability 0,90
TF
Evidence RBPdetect2
Probability 0,95
Protein sequence
MADYNDKVVNAEPILPEGTGGGTFVDDGQFHTEDTTTVTLLGNGNSTTPLKAAVVVDPASGNALVAGPDGLSVGVSPLSDNLLVLAGGKLYVAPPQIVVPISTKTGNVLVEVTDPGEEGLFVPPGEKGDKGDKGDQGDPGVGIYIQGIIGDPSQLPPAATMQEGDTYVIGTHYWTVVKGTWADLGDFAGPQGQDGIGLVIRGAFSDTSLLPTQGNTEGDTYIIQDQMWVWTGDADGWQPVGQVGPAGPQGATGATGPQGPKGDKGDRGEKGDQGIQGIQGLTGPQGPKGDKGDKGNDAAIVKLKGTKATVDELPEFGNAVADAWVVQTDNHVWVWTSDDTWEDIGPVQGPKGDQGDVGPQGPQGQKGDQGPEGPAGAEGPAGAEGPQGIQGPIGPKGDKGDTGLTGPVGPQGPQGPKGDRGETGYGARVLGTKGAVSDLPATGTPGDAWIIVPNLYVWSQADAQWINVGPYVGPKGDKGDTGATGDVGPKGDTGADGPQGPKGDQGDEGPQGPAGATGPQGPMGVSLTARGTVANQAALPSGAATGDLYTTEDTGEAFAFDGTNWVNLGVMRGPQGDPGIQGDQGPMGASIVAKGVIATYEDLLDVQNPEQGWMYSVTSGGNKGYSYVYSGTAWEPMGDLTGPEGPQGPQGPEGQMGAGVEILGKLDNTTELPSTGELGQGYLIEGDFWGWTGTTYENLGPIQGPQGDVGPQGPQGPQGIQGIQGIKGDQGTLWLNFSRNPGPADGRIGDYFINKSTLEYFQKTSATAWASLGYMGGGNVYDTASTIPQARTNAGWVDVPVLEAPADTGYYVRVDNAWKKLDRYDLLVTSTTGAMDVGVSQVFKVDGTANKTMSFTNLPANRAMTIVIVFSGSGASLTWPGNLAWSNGTAVTLGTTRTVVTILWDGTNLTGTTSLTVD
Physico‐chemical
properties
protein length:918 AA
molecular weight: 93680,84040 Da
isoelectric point:4,16996
aromaticity:0,06863
hydropathy:-0,40839

Domains

Domains [InterPro]
DC_0915
ATT
1–242
DC_0915 DC_1340 IPR008160 DC_0114
IPR050149
Unmapped
115–731
IPR050149
IPR008160
STR
241–296
IPR008160 IPR008160 DC_1340 G3DSA:1.20.5.320
DC_1340
STR
390–502
DC_1340
G3DSA:1.20.5.320
STR
497–554
G3DSA:1.20.5.320
YP_009148815.1
1 918
Architecture
ATT
STR
RBD
STR
RBD
ATT 1-242 | STR 243-585 | RBD 586-701 | STR 702-751 | RBD 752-917 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Salmonella phage SSE121
[NCBI] 		1204529 Uroviricota > Caudoviricetes > Vequintavirinae > Seunavirus SSE121 >
Host Salmonella
[NCBI] 		590 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_009148815.1 [NCBI]
Genbank nucleotide accession
NC_027351.1 [NCBI]
CDS location
range 13752 -> 16508
strand +
CDS
ATGGCAGATTACAATGATAAGGTCGTCAACGCTGAACCTATCCTTCCGGAAGGTACTGGCGGTGGAACCTTTGTGGACGATGGACAATTCCACACAGAAGATACGACCACAGTAACACTTCTCGGTAATGGTAACTCCACTACTCCGCTGAAGGCCGCTGTTGTTGTAGATCCTGCTTCCGGTAACGCCCTTGTAGCTGGCCCTGACGGACTTTCTGTCGGGGTTAGCCCTCTCAGTGATAACCTGCTTGTATTGGCAGGTGGAAAGCTGTATGTTGCTCCTCCTCAGATCGTTGTGCCTATTTCAACCAAGACCGGAAACGTTCTTGTTGAAGTGACCGACCCTGGTGAAGAAGGTCTTTTTGTCCCTCCCGGAGAAAAAGGCGATAAGGGCGACAAGGGTGATCAAGGTGATCCGGGTGTTGGTATTTACATCCAAGGAATTATTGGAGACCCATCCCAACTTCCTCCTGCTGCAACCATGCAAGAGGGAGATACTTACGTAATTGGAACTCACTACTGGACAGTTGTGAAAGGCACTTGGGCTGATCTTGGCGATTTCGCTGGACCTCAAGGGCAAGATGGTATAGGATTGGTGATCAGGGGTGCATTTTCTGACACATCTCTCCTTCCGACTCAAGGAAATACGGAAGGCGATACCTACATCATCCAAGACCAGATGTGGGTTTGGACTGGCGATGCAGACGGATGGCAACCTGTAGGGCAAGTAGGGCCTGCTGGTCCACAAGGGGCTACTGGTGCCACAGGACCGCAGGGGCCTAAAGGCGATAAAGGTGACCGTGGAGAGAAAGGTGACCAAGGTATTCAAGGGATTCAGGGCTTAACAGGGCCTCAAGGACCTAAAGGTGACAAGGGCGATAAAGGTAACGATGCCGCAATTGTAAAACTGAAGGGAACAAAAGCAACAGTTGACGAATTGCCTGAATTTGGTAATGCTGTGGCTGATGCATGGGTTGTTCAAACGGACAATCACGTTTGGGTTTGGACATCTGACGACACTTGGGAAGATATTGGTCCAGTTCAAGGACCTAAAGGTGACCAAGGTGATGTCGGCCCACAAGGGCCTCAAGGACAAAAGGGCGACCAAGGCCCAGAAGGTCCTGCGGGGGCAGAGGGTCCTGCTGGAGCAGAAGGTCCACAGGGTATTCAAGGACCTATCGGTCCAAAGGGAGATAAGGGCGATACTGGTTTAACTGGCCCTGTCGGTCCACAAGGACCTCAAGGTCCGAAGGGTGATCGTGGTGAAACTGGTTATGGTGCTCGTGTTCTTGGGACAAAAGGCGCTGTTTCAGATCTTCCTGCAACAGGAACACCAGGCGATGCTTGGATTATAGTTCCAAACCTTTACGTCTGGAGTCAGGCTGATGCTCAATGGATAAACGTAGGTCCATACGTTGGTCCAAAAGGCGACAAGGGTGACACCGGGGCTACAGGGGATGTCGGTCCTAAAGGTGATACTGGGGCTGATGGCCCACAGGGGCCTAAAGGCGATCAGGGTGATGAAGGACCTCAAGGTCCCGCAGGTGCTACAGGACCACAGGGTCCAATGGGCGTTTCACTGACTGCCAGAGGTACAGTAGCCAATCAAGCAGCTTTGCCGTCCGGCGCAGCAACTGGAGATCTTTACACCACAGAGGACACTGGAGAAGCTTTTGCTTTCGATGGTACTAACTGGGTAAATCTTGGAGTCATGCGTGGCCCACAGGGTGATCCTGGTATCCAAGGTGACCAAGGACCGATGGGTGCAAGTATCGTTGCTAAAGGTGTTATTGCGACTTATGAGGACCTGCTTGATGTTCAAAACCCAGAACAAGGCTGGATGTATTCAGTAACTTCCGGTGGGAACAAAGGTTATTCTTATGTTTACAGCGGGACCGCATGGGAACCGATGGGTGACTTGACAGGTCCAGAAGGCCCTCAAGGACCACAAGGACCAGAGGGTCAGATGGGTGCTGGGGTAGAAATCCTTGGCAAACTCGACAATACCACTGAACTTCCTTCTACTGGAGAGCTTGGTCAGGGATACTTGATTGAGGGAGATTTCTGGGGATGGACTGGAACCACTTATGAGAACTTGGGACCTATCCAAGGGCCTCAAGGTGATGTTGGACCACAAGGTCCACAGGGTCCACAAGGTATTCAGGGTATCCAGGGTATTAAAGGAGACCAAGGAACACTTTGGTTAAACTTCTCCCGTAACCCAGGTCCTGCTGATGGGCGAATTGGTGATTACTTCATCAATAAATCCACATTGGAATACTTCCAGAAAACATCTGCTACCGCATGGGCTTCTCTGGGGTACATGGGTGGAGGAAACGTTTATGATACAGCCTCTACCATTCCGCAAGCTCGAACAAATGCTGGGTGGGTTGATGTTCCGGTACTTGAAGCACCAGCAGATACAGGCTATTATGTCCGTGTAGACAATGCGTGGAAGAAACTTGATCGTTACGATCTTCTGGTTACTTCTACAACTGGGGCTATGGATGTTGGCGTGTCTCAAGTCTTCAAGGTTGACGGTACAGCAAACAAAACCATGAGCTTCACTAACCTACCTGCAAACAGAGCAATGACCATCGTTATCGTGTTCTCTGGTTCCGGTGCGTCACTGACGTGGCCTGGCAACCTAGCATGGTCAAACGGCACAGCGGTTACTCTGGGAACTACCCGCACGGTTGTTACTATCCTCTGGGACGGTACAAACCTGACAGGTACAACCTCTTTGACTGTCGATTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
8bc00d1b03c7cbeb2608e14bd4eae773408068bb4645fc1dd378146f4ac506e0
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7028
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Bacteriophages quickly and effectively reduce contamination of various foods with Salmonella Woolston,J., Parks,A.R., Hanna,L.F., Charbonneau,D. and Sulakvelidze,A. 2016-07-02 — GenBank