Protein

UniProt accession
R9R4H3 [UniProt]
Protein name
Putative phage minor structural protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect2
Probability 0,92
Protein sequence
MKKVTSSRAYDCLVQKYIGSAYDKVKDVSDNLEKVSSVADNLTQVNLLIPELDNIKACAENIDEIKNAPIAAENANNSAILANDVLEQIKDIVSDLEAVPLGNGSWQAGQTFTAYNQFMVYNGIAYKPLTTTTLPYEPTGATPDLAFVGPFDANDHSKLNNRDEAGAHPASAIDGAMWHVGTVKDLQGLVGVGGIQVSVASYHDLDYLSGGGTFVWGTGRHNGGTFIDPNRPFPTDWNDQGQLKTWFAESSSDVGGWSRTYENDINVSYFGYLKDSNNNETFKAVANHVELSKERVSGYEKDTTFVVSTSQISTIQKAANLFPRYLDFKFSIEIEPGDYSAEDVKVPSTSRATNQNLHEPCSATIKSATGNPDDVLVGSIFFVNAGGSNTQDITIDHTTPLYSGESGGLAYWFCSGEVSCSNIKYSAGFVGAGILAYGSKVEARTIDVTNLDVLVRAKRGAEVHIRFCTGDFTGDRVIVSYEGSGVVSGNHTFTKSSGVWADVDGTSTVINRDTGEYSYSVYSQIPLLRDNNLLLKRTTNFGSTETLLDGVKPLNTDSVFTQLGDYCFVSGSNGKNLTLDRNNYQSADNHRRYKSDGTASGLSLSADGNIYFHFYAAGTEDDVVTRASAKSIFMNAGGLRNDSDNVPWINGSSSGKFVLTPSGTFGASSDSNAIQLLNRTGTDGAVTSFYKNGSAVGGISVSSNATAYNTSSDYRLKTNIRECDNALSIVKNLNPVTFDWIRDGSTTTGFLAHELAEQIPEAVTGTKDELNQDGEPVYQAVDHSKIVPYLTKVIQDLMDRVEQLERIK
Physico‐chemical
properties
protein length:808 AA
molecular weight: 87348,25090 Da
isoelectric point:4,83662
aromaticity:0,09282
hydropathy:-0,34097

Domains

Domains [InterPro]
IPR030392
712–764
IPR030392
IPR030392
712–808
IPR030392
R9R4H3
1 808
Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage Vibrio phage JA-1
[NCBI] 		1283071 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Vibrio cholerae
[NCBI] 		666 Bacteria > Proteobacteria > Gammaproteobacteria > Vibrionales > Vibrionaceae > Vibrio

Coding sequence (CDS)

Coding sequence (CDS)

No CDS data available.

Gene Ontology

Description Category Evidence (source)
GO:0098015 virus tail Cellular Component IEA:UniProtKB-KW (UniProt)

Enzymatic activity

No enzymatic activity data available.

Tertiary structure

PDB ID
f7fc829a6f758d6320e3ef5fa093e3d3bb599e660bd56cccf80c5c5f5d73cc48
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6264
Evidence 0,6264
Download PDB

Literature

Title Authors Date PMID Source
Whole genome sequencing and comparative genomic analyses of two Vibrio cholerae O139 Bengal-specific Podoviruses to other N4-like phages reveal extensive genetic diversity. Fouts DE, Klumpp J, Bishop-Lilly KA, Rajavel M, Willner KM, Butani A, Henry M, Biswas B, Li M, Albert MJ, Loessner MJ, Calendar R, Sozhamannan S 2013-05-28 23714204 PubMed
Whole genome sequencing and comparative genomic analyses of two Vibrio cholerae O139 Bengal-specific Podovirusesto other N4-like phages reveal extensive genetic diversity Derrick E Fouts, Jochen Klumpp, Kimberly A Bishop-Lilly, Mathumathi Rajavel, Kristin M Willner, Amy Butani, Matthew Henry, Biswajit Biswas, Manrong Li, M John Albert, Martin J Loessner, Richard Calendar, Shanmuga Sozhamannan 2013-05-28 10.1186/1743-422X-10-165 DOI