Protein

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Genbank accession
QNR51804.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
Protein sequence
MSTNPEEVIERLNAAAEDTEASNLLLRQFIQGGQDEVVELDDGNIPTLRNLLEEVRNRAGSRRFNINFSVNDLLRYEMKAEPLFGAIIGEDVVVDRALSSCIFRLNTAPTADIALQITLGENRFDVVFAAGSKDGVVQNGSAELINVPRSSALEVSLNSYARGAAQIRIMMELMIVEIY
Physico‐chemical
properties
protein length:179 AA
molecular weight: 19717,10170 Da
isoelectric point:4,48121
aromaticity:0,05587
hydropathy:-0,01788

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Xanthomonas phage Xoo-sp14
[NCBI] 		2769337 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Xanthomonas oryzae pv. oryzae
[NCBI] 		64187 Pseudomonadota > Gammaproteobacteria > Lysobacterales > Lysobacteraceae > Xanthomonas > Xanthomonas oryzae

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QNR51804.1 [NCBI]
Genbank nucleotide accession
MT939492.1 [NCBI]
CDS location
range 79740 -> 80279
strand +
CDS
ATGAGCACCAATCCCGAAGAAGTCATCGAGCGTCTCAACGCAGCCGCCGAAGATACCGAGGCCAGCAATCTGCTGCTGCGTCAGTTCATCCAGGGCGGGCAGGACGAAGTGGTGGAGCTGGACGATGGCAACATCCCCACGCTGCGCAACCTGCTGGAAGAAGTGCGTAACCGCGCTGGTTCGCGTCGCTTCAACATCAACTTCTCCGTCAACGACCTGCTGCGTTACGAGATGAAGGCCGAGCCGCTGTTCGGCGCCATCATCGGTGAAGACGTTGTTGTCGATCGTGCGCTCAGCTCGTGCATCTTCCGACTCAACACTGCACCGACGGCTGACATCGCTCTGCAGATCACTCTGGGCGAGAATCGCTTCGACGTGGTCTTCGCAGCCGGCAGTAAGGATGGCGTGGTTCAGAATGGCAGCGCTGAGCTGATCAACGTACCACGCAGCTCGGCACTGGAAGTGTCGCTGAACAGCTACGCTCGCGGCGCTGCTCAGATCCGCATCATGATGGAACTGATGATCGTCGAGATCTACTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
94091539e0460cbea775812a05fc09fb5568b67d89cb7077406acccfa4aa1b77
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,3703
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Characterization and Sequence analysis of novel giant bacteriophage, Xoo-sp14 Nazir,A., Dong,Z., Liu,J., Tong,Y. and Peng,D. 2020-11-25 — GenBank