Protein

View in Explore
Genbank accession
AGC33795.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TF
Evidence Phold
Probability 1,00
Protein sequence
MAVTAVLFETSSARGNRLDPDVRDEIEALAPGLETGEVTTDKIANDAVTREKIDAGAVGSVELDDDAVKAQHIDDGAVGTPALAAGAVTSEKTGIGVVTAEDASGNPVEVKQVYMTVAQYNALATKDPNTDYYLS
Physico‐chemical
properties
protein length:135 AA
molecular weight: 13968,18950 Da
isoelectric point:4,15325
aromaticity:0,03704
hydropathy:-0,17481

Domains

Domains [InterPro]
DC_1261
STR
2–135
DC_1261
IPR056923
RBD
113–132
IPR056923
AGC33795.1
1 135
Architecture
STR
STR 2-135
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Mycobacterium phage Serpentine
[NCBI] 		1235694 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AGC33795.1 [NCBI]
Genbank nucleotide accession
JX649096.1 [NCBI]
CDS location
range 36965 -> 37372
strand +
CDS
ATGGCCGTCACCGCTGTCCTGTTTGAAACCTCAAGCGCCCGAGGTAACCGCCTCGACCCCGATGTGCGTGACGAGATTGAGGCGCTCGCGCCGGGCCTTGAGACCGGCGAGGTCACGACCGACAAGATCGCCAATGACGCGGTCACGCGCGAGAAGATCGACGCGGGCGCGGTGGGGTCGGTCGAGCTCGATGACGACGCGGTCAAGGCGCAGCACATCGATGACGGGGCGGTGGGGACACCAGCGCTCGCGGCAGGCGCGGTCACCTCAGAGAAGACCGGCATCGGTGTGGTCACCGCCGAGGATGCCTCGGGCAACCCCGTCGAGGTCAAGCAGGTCTACATGACCGTGGCGCAGTACAACGCGCTGGCGACAAAAGACCCGAACACGGATTACTACCTGAGCTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
070247a62a33c42e245ef720ae94141000ed3209704382520a742b03b0815c87
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8004
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Genome sequences of five b1 subcluster mycobacteriophages Breakwell,D.P., Barrus,E.Z., Benedict,A.B., Brighton,A.K., Fisher,J.N., Gardner,A.V., Kartchner,B.J., Ladle,K.C., Lunt,B.L., Merrill,B.D., Morrell,J.D., Burnett,S.H. and Grose,J.H. 2013 24285667 GenBank