Protein

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Genbank accession
QIG65135.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence RBPdetect
Probability 0,83
Protein sequence
MKIQFLDTDQTITGTAGTHIVVPGFQVLHYNKPCLVKLNILDDEPLNSWVEDASAVVDNLPGATVKLPIFEGNIIDLSVMASYFLTFQKELALFPTKASRTVTMNFTVNPNGGVKYYYFRVYVMNIDAPNVLKAKAMYGTDFLNGEGVRVPVAHAFNDQFWFTPILATTDLEYELNDGEWLAYGKQGDNTIPDIHGTYSKIEVRNDSTSDLLLRKYYAPLVPSDCAITFRWLNTTGSMDYVSCYNWTVTPTIRRDSLGGTVTKNEIQAIFPVNNDNLNALSRLAVSPDIQIKGLLPDDKAVRAIGSTTSGVKITASGLNRTITLKFVY
Physico‐chemical
properties
protein length:328 AA
molecular weight: 36421,09480 Da
isoelectric point:5,42542
aromaticity:0,10671
hydropathy:-0,05213

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
QIG65135.1
1 328
Domain Start End Length (AA) Confidence
N-terminal 1 111 111 0,4356
Central domain 112 310 200 0,5333
C-terminal 311 328 17 0,9617
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-111
Central
112-310
C-terminal
311-328

Taxonomy

  Name Taxonomy ID Lineage
Phage Bacteroides phage SJC13
[NCBI] 		2710510 No lineage information
Host Bacteroides thetaiotaomicron
[NCBI] 		818 cellular organisms > Bacteria > Pseudomonadati > FCB group > Bacteroidota/Chlorobiota group > Bacteroidota

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QIG65135.1 [NCBI]
Genbank nucleotide accession
MT074151 [NCBI]
CDS location
range 8006 -> 8992
strand +
CDS
ATGAAAATACAGTTTTTAGATACCGATCAGACGATCACGGGAACGGCGGGTACTCACATAGTCGTGCCGGGCTTCCAAGTGCTACACTACAATAAGCCATGCCTTGTTAAACTTAACATACTGGATGATGAACCGCTTAACTCGTGGGTAGAGGACGCAAGCGCCGTAGTTGATAACTTACCGGGTGCAACCGTTAAATTACCGATATTTGAGGGCAACATCATAGACCTTAGCGTTATGGCGTCTTACTTCCTTACTTTTCAGAAGGAACTGGCTTTATTTCCCACGAAGGCAAGTAGAACGGTAACGATGAACTTCACAGTTAATCCGAACGGGGGAGTTAAGTACTACTATTTCCGCGTCTACGTGATGAACATAGATGCACCGAACGTTCTTAAGGCAAAAGCGATGTACGGTACTGACTTCCTAAACGGTGAGGGGGTGCGGGTTCCCGTGGCGCATGCGTTCAATGACCAGTTTTGGTTCACACCGATTCTTGCTACTACGGATTTAGAATACGAACTGAACGACGGAGAATGGCTAGCGTACGGAAAGCAGGGAGATAACACCATCCCGGACATTCACGGGACGTATAGCAAGATAGAGGTTCGTAATGACTCGACTTCTGACCTGTTGCTAAGGAAGTACTACGCTCCTTTAGTCCCTTCTGATTGTGCTATTACGTTCCGGTGGCTTAATACTACGGGGTCTATGGACTACGTTTCGTGCTATAATTGGACGGTCACGCCCACGATTCGCCGGGATTCGCTAGGCGGAACGGTTACGAAGAACGAAATACAGGCGATTTTCCCGGTAAATAATGACAATTTGAACGCTTTATCCCGCCTAGCGGTTAGCCCGGACATTCAAATTAAGGGACTGTTACCGGATGATAAGGCGGTTCGGGCGATTGGGTCTACCACTTCGGGCGTTAAAATAACGGCTTCGGGGCTTAACAGAACGATAACTTTAAAATTCGTGTACTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
4407df963d554fd2ce0ad77c90db624ab751741b82abefecc057aa5cd4b8bdd5
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,3621
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Bacteroides thetaiotaomicron-infecting bacteriophage isolates inform sequence-based host range predictions Hryckowian,A.J., Merrill,B.D., Porter,N.T., Van Treuren,W., Nelson,E.J., Garlena,R.A., Russell,D.A., Martens,E.C. and Sonnenburg,J.L. 2020 — GenBank