Protein

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Genbank accession
YP_009888938.1 [GenBank]
Protein name
tail spike protein
RBP type
TF
Evidence GenBank
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
TSP
Evidence RBPdetect2
Probability 0,94
Protein sequence
MANKPTQPLFPLGLETSESSNIKGFNNSGTIEHSPGAVMTFPEDTEVTGLPSSVRYNPDSDEFEGYYENGGWLSLGGGGIRWETLPHAPSSNLLEGRGYLINNTTGTSTVVLPSPTRIGDSVTICDAYGKFATYPLTVSPSGNNLYGSTEDMAITTDNVSATFTWSGPEQGWVITSGVGLGQGRVYSREIFTQILASETSAVTLNTPPTIVDVYADGKRLAESKYSLDGNVITFSPSLPASTELQVIEYTPIQLGNGGGSGSSTITWVYNGGSAIGGETEITLDIVVDDVPAIDINGSRQYKNLGFTFDPLTSKIALAQELDAEDEVVVIINGTPNIYNQIDYTLREVARVTNVKDTEVIYFSVGVVLSGYKVIYDKVTQRSYFIPELPTGTTAVSLSSSAVLVHSAGSVDLGALAVSREEYITLSGTFDSGAVINTKNELLTHTDGKYRWDGTLPKTVAPDSTPATTGGVGVGAWISVGDAALRVELSSSADGKGSSLIAHGSGTVFDELNSRLPISRFVDTTGVLPADDGLIEALAYSAAHGLTLDITGKVRITKTVKQPPNSSVDCRNGVIFCEDPSGLENGLMWSVDDPGIVNEKTTRIGTLILSTSPVIGEGLIVDRDVMGLSITTPKVVVENVYTYGCRLGGVKTGPKGYEIVLKMVTCFINSWTDKSKWGIDLSAADGINGSLVCVGYARGIRSSGTNHIDFMHPWGFPATSGNEYQNRQLLTALSLDSNTHVTHCYLDSVDTEGYDVAQSGNDGVNIVFNGYNSTIDKCFILVHGQTKPGKVKLYNAIGTQNTISNLMVNNDSALGTPAVIYPSAVRKWQNHVLGGNVTYLTNRFTYPASSLIAGGGFTGNIEFRKEGIDNIRVTAKITCTDTNITDAYFGISLPDSLGIDNTVGNITSRTMLTSSAGNQTDITYENGKIYPIRISEAAGSYVYFAKDDVRLGNLNFVINALNTTAGY
Physico‐chemical
properties
protein length:966 AA
molecular weight: 102868,68950 Da
isoelectric point:4,73158
aromaticity:0,08178
hydropathy:-0,09172

Domains

Domains [InterPro]
DC_1064
ATT
4–188
DC_1064 G3DSA:3.30.2020.50 G3DSA:2.10.10.80 DC_1603
G3DSA:3.30.2020.50
ATT
335–420
G3DSA:3.30.2020.50 G3DSA:2.10.10.80
IPR040775
RBD
416–481
IPR040775
YP_009888938.1
1 966
Architecture
ATT
ATT
STR
ATT 4-188 | ATT 330-491 | STR 492-961 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
YP_009888938.1
1 966
Domain Start End Length (AA) Confidence
N-terminal 1 528 528 0,9972
Central domain 529 830 303 0,9880
C-terminal 831 966 135 0,9852
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-528
Central
529-830
C-terminal
831-966

Taxonomy

  Name Taxonomy ID Lineage
Phage Salmonella phage pertopsoe
[NCBI] 		2713310 Uroviricota > Caudoviricetes > Pantevenvirales > Cvivirinae > Kuttervirus
Host Salmonella enteritidis
[NCBI] 		149539 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_009888938.1 [NCBI]
Genbank nucleotide accession
NC_049507.1 [NCBI]
CDS location
range 5856 -> 8756
strand +
CDS
ATGGCCAACAAACCAACACAGCCTCTTTTCCCTTTGGGTTTAGAAACTTCTGAGTCTTCGAACATAAAAGGCTTCAACAACTCCGGCACTATTGAGCATTCCCCTGGTGCCGTAATGACATTTCCTGAAGATACTGAAGTTACAGGTCTTCCATCTTCTGTACGTTACAATCCTGATAGCGATGAATTTGAAGGTTATTACGAAAACGGTGGTTGGCTGTCTTTGGGGGGCGGTGGAATACGCTGGGAAACGCTCCCTCACGCTCCCTCTAGCAATTTGTTAGAAGGTCGTGGCTATCTCATTAATAATACCACAGGGACATCTACAGTGGTTCTTCCTTCCCCTACGCGTATTGGGGATTCCGTTACTATTTGTGATGCTTATGGGAAATTTGCCACTTACCCATTGACCGTGTCTCCTTCTGGAAATAATTTGTATGGTTCCACTGAAGACATGGCTATAACAACTGATAATGTTTCAGCAACGTTCACTTGGTCTGGACCTGAACAAGGTTGGGTTATCACATCCGGCGTCGGTCTTGGTCAAGGCCGTGTCTACAGTCGTGAAATCTTTACACAAATTTTGGCGTCTGAAACAAGTGCTGTCACTCTCAATACTCCACCAACAATCGTGGACGTGTATGCTGACGGAAAACGTCTTGCGGAATCCAAATATTCACTAGATGGGAATGTAATCACTTTCAGTCCTTCTTTGCCAGCCAGCACAGAACTTCAGGTGATTGAATATACTCCTATTCAATTGGGTAATGGCGGTGGTTCTGGTTCTTCTACGATTACCTGGGTCTATAATGGGGGTTCAGCGATTGGCGGTGAAACCGAAATCACGTTAGACATCGTTGTTGATGATGTTCCGGCCATTGATATAAACGGAAGTCGCCAGTATAAAAATCTGGGGTTCACATTCGATCCATTAACCAGTAAAATCGCTCTTGCGCAAGAACTGGATGCGGAGGATGAAGTTGTTGTAATTATCAATGGAACGCCAAACATCTATAATCAAATTGATTATACTTTGCGGGAAGTGGCTCGTGTAACCAATGTTAAAGATACAGAGGTCATTTATTTTAGTGTTGGTGTTGTGTTAAGTGGATATAAAGTTATCTATGATAAAGTAACACAGAGATCATATTTTATTCCAGAGCTACCGACTGGAACCACGGCAGTCAGCCTTAGTTCTTCGGCTGTGCTTGTACATTCTGCTGGTAGTGTTGATCTGGGCGCATTAGCTGTATCTCGTGAAGAATATATTACATTGTCTGGGACATTTGATTCTGGTGCTGTCATCAATACTAAAAATGAATTACTCACCCACACGGATGGAAAGTATCGTTGGGATGGTACACTTCCTAAAACCGTTGCTCCTGACTCAACTCCTGCGACAACAGGCGGCGTTGGTGTTGGCGCATGGATTAGTGTTGGTGATGCAGCACTAAGAGTTGAACTTAGTTCAAGTGCAGATGGTAAAGGCAGTTCACTAATTGCTCACGGAAGCGGGACTGTTTTTGATGAGCTAAATTCGCGTCTTCCAATATCGCGGTTTGTTGATACTACCGGCGTTTTACCTGCAGATGACGGGTTAATTGAGGCGTTGGCATATTCGGCAGCTCATGGACTGACACTGGATATTACCGGAAAAGTGAGAATAACAAAAACCGTTAAACAACCACCAAACAGTTCAGTAGACTGCCGAAATGGTGTCATTTTTTGTGAAGACCCGTCAGGGCTTGAGAACGGCCTGATGTGGTCTGTTGATGACCCCGGAATTGTTAACGAGAAAACAACTCGCATTGGTACGCTAATCTTGTCAACTAGCCCTGTTATCGGGGAAGGTTTAATCGTTGACCGAGACGTGATGGGCTTATCAATAACAACGCCGAAAGTAGTCGTTGAGAATGTATATACATATGGGTGTCGGCTTGGTGGTGTGAAGACTGGCCCTAAGGGTTATGAAATAGTCTTAAAGATGGTTACATGTTTCATAAATAGTTGGACTGATAAATCAAAATGGGGGATAGACTTATCTGCTGCTGATGGAATAAACGGCTCACTTGTTTGTGTTGGCTATGCTCGCGGTATCAGATCTTCAGGGACGAATCACATTGACTTTATGCATCCATGGGGATTCCCTGCAACGTCAGGAAATGAATATCAAAACAGACAGCTACTTACTGCGCTTAGTCTCGATAGTAATACCCACGTCACGCACTGCTATTTAGATAGCGTTGATACTGAAGGTTATGATGTAGCACAATCAGGTAATGATGGGGTAAATATAGTCTTTAATGGTTACAATTCTACTATTGATAAGTGCTTCATCCTGGTTCATGGGCAAACTAAACCCGGTAAGGTTAAGCTGTATAATGCTATTGGTACGCAGAATACTATTAGTAACTTAATGGTTAATAATGATTCTGCCTTGGGTACTCCTGCTGTAATCTACCCCTCTGCTGTACGTAAATGGCAGAACCACGTGTTAGGGGGTAATGTTACATATCTGACTAATAGATTCACCTACCCGGCCTCTTCACTAATTGCTGGAGGAGGTTTCACTGGTAATATCGAGTTTAGGAAAGAAGGTATTGATAATATTAGGGTGACTGCCAAAATTACTTGTACTGATACAAACATCACTGACGCATACTTTGGTATTTCGTTACCGGATAGTTTAGGTATTGACAATACTGTAGGCAACATTACGAGTAGGACTATGCTAACCAGTAGTGCTGGTAACCAAACTGATATCACATATGAGAATGGCAAGATATACCCTATACGCATATCAGAGGCAGCAGGTTCTTATGTGTATTTTGCTAAGGATGATGTTAGGTTAGGTAATCTTAACTTTGTAATAAATGCTCTAAATACAACAGCAGGTTATTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
1730b24fc6f8fa7c79718c3de1f7c66b3fd5761b10007057b43840c0cddfadf6
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6873
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50