Protein

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Genbank accession
QKN88333.1 [GenBank]
Protein name
central tail fiber J
RBP type
TF
Evidence Phold
Probability 1,00
Protein sequence
MVLPSNLGAGSLSSSGQHEMKQLGATATSFFDSTMKDGDIGSRQFVTLVDVIGEGQIAGFPSAIDAGLTHGSISYRIASLKDLFLNGTQVLRDGASNTDPNINDFNFGTSEANAPSFFSRLGTSNQTKIQGLVETERDRTVGVTVTQSQSQTVTITDTSTEGVRVTIGFPRLQEIEDDGNIKGTTVEYDIEVRKQDNTLIKKLIPRLC
Physico‐chemical
properties
protein length:208 AA
molecular weight: 22324,57480 Da
isoelectric point:4,82872
aromaticity:0,05769
hydropathy:-0,28125

Domains

Domains [InterPro]
DC_2144
STR
19–203
DC_2144
IPR055385
ATT
135–198
IPR055385
QKN88333.1
1 208
Architecture
STR
ATT
STR 19-134 | ATT 135-203 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Prochlorococcus phage P-HS2
[NCBI] 		2740745 No lineage information
Host Prochlorococcus marinus subsp. pastoris str. CCMP1986
[NCBI] 		59919 Bacteria > Cyanobacteria > Prochlorales > Prochlorococcaceae > Prochlorococcus > Prochlorococcus marinus

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QKN88333.1 [NCBI]
Genbank nucleotide accession
MT490303.1 [NCBI]
CDS location
range 34677 -> 35303
strand +
CDS
ATGGTTTTACCAAGTAATTTAGGAGCAGGCAGTTTATCTTCATCTGGCCAACATGAGATGAAACAGCTTGGTGCGACTGCCACTTCTTTCTTTGACTCCACCATGAAAGATGGAGATATAGGGTCAAGGCAGTTTGTTACATTAGTGGATGTAATTGGGGAAGGTCAAATAGCTGGTTTTCCCTCTGCTATAGATGCTGGATTAACTCATGGGTCTATTTCTTATCGAATAGCAAGCCTTAAAGATTTATTTCTTAATGGAACTCAAGTTTTAAGAGATGGTGCTAGTAATACAGATCCAAATATTAATGATTTCAATTTTGGTACAAGTGAAGCTAATGCCCCATCTTTTTTTTCAAGGCTTGGCACTTCAAACCAGACAAAAATACAAGGACTTGTAGAAACTGAAAGAGACAGAACTGTAGGAGTTACAGTAACACAATCTCAATCTCAAACTGTAACTATTACTGACACTTCAACTGAGGGTGTAAGGGTAACTATTGGTTTTCCTAGATTACAAGAAATTGAAGATGATGGAAATATAAAAGGAACTACTGTTGAATACGATATAGAGGTAAGAAAACAAGATAATACTTTAATAAAAAAATTAATCCCGAGACTTTGTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
b10a29ac26624134ebd426a9ef6da0dfeb42b7b84df525f11b5928240436f040
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,7346
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Frequency of mispackaging of Prochlorococcus DNA by cyanophage Laurenceau,R., Raho,N., Forget,M., Arellano,A. and Chisholm,S.W. 2020 — GenBank