Protein

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Genbank accession
XYL03363.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
Protein sequence
MKLNITAPGLFFNRSGDRVTVDQIVLQNSAGAVVSFPVKGRIWKMYRGAYRPREFKIWTASGKFYAGEHSRSPWDIVGEVIADDVRPVYWQDLTDDQKATAAAKYHNGEGTPDDYFTYTPDQFIVVNGDVYDLDADAAVYEVEGLKGHVRILESTKADGAALAVQCVEGWDVVSVYRVKVTP
Physico‐chemical
properties
protein length:182 AA
molecular weight: 20270,51750 Da
isoelectric point:5,18448
aromaticity:0,12088
hydropathy:-0,26374

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Salmonella phage vB_Sen-P15
[NCBI] 		3453364 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Salmonella enteritidis
[NCBI] 		149539 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XYL03363.1 [NCBI]
Genbank nucleotide accession
PV916287.1 [NCBI]
CDS location
range 55918 -> 56466
strand +
CDS
ATGAAACTGAATATTACCGCGCCGGGCCTTTTCTTTAATCGTAGCGGCGACCGCGTCACCGTGGATCAAATCGTTTTACAGAATAGCGCCGGGGCCGTCGTGTCATTCCCGGTTAAGGGCCGGATCTGGAAAATGTACCGGGGCGCATACCGTCCGCGCGAGTTTAAGATCTGGACGGCATCGGGCAAGTTTTACGCGGGCGAACATTCCCGATCGCCGTGGGATATTGTCGGCGAAGTTATCGCGGACGATGTGCGCCCGGTCTACTGGCAAGATCTGACCGATGACCAGAAAGCGACGGCGGCGGCCAAATATCACAACGGCGAAGGCACGCCGGACGATTATTTCACCTATACGCCGGATCAATTCATTGTGGTTAATGGTGATGTGTACGATCTGGACGCCGACGCGGCCGTTTATGAGGTCGAAGGCTTAAAAGGTCATGTGCGCATACTGGAAAGCACGAAGGCGGACGGGGCCGCGCTGGCGGTGCAATGTGTCGAAGGTTGGGACGTGGTAAGCGTTTACCGCGTAAAGGTGACACCATGA

Genome Context

Genome Context

Tertiary structure

PDB ID
8e6b6887dfdc14f4d6ec00e0ac72d151d3ce51cc278f6e8cdb486acaec11d6cd
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,7891
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Jerseyvirus vB_Sen-P15 Urganci,N.N. and Yildirim,Z. — — GenBank