Protein

View in Explore
Genbank accession
QBX24955.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TF
Evidence RBPdetect
Probability 0,54
TF
Evidence RBPdetect2
Probability 0,96
Protein sequence
MPDVPSGNRNLIIRSQIQNGYIDNAGNLVSSNDHFTTGFIDGTNNKQFTIAAPKLGGGLLEWFRLVKYDSDKNFLERDIISYTQNAKTVKVINLADNVAYFKVSFDGVYDESFKIERGNVATPYSQAPEDLGWSTATLVPTQQQRYLWKFEYVYYSDGSVEITDPVNLSIAGADANTTGVTDAINQTNQTVAGLQSSVSQAQSDLAAVSSNLTQARQNLESSIASVNTKAQAVETTLAQVQSTANSNSQKTATLENDLDGLSAKFSSLKVGAVNLLKKTKTFNWSSFYGSSKLTDETYQGCAVRYLKSSTATTGYQEVVQFSNCVYPTLGGDYVASFWAKGSGTFCAFFYGGNGYLQVAAAESSQGSTITSSDGRMEFTLSEDWQRYWIKYKLKTSPASATTVAKHFLLRHNANGKEEEIWVAGCQLEQGNIATDYSPNEADLELKVADYKQTADQNYASLQSTVQALDGTVTANKATADQTAAGFKTRIESLETYQAGETTRANQYFESAKTETARQLAAERTAIANDYVAKSTYTSDVTGIRSDLTATTTTANTTKTNLANYQASNDQAVASLQSNLQTTNGNVSSLQTQISAIPGQITSAVSAVEGKIPTSLGGRNLIIKSQIQNGYIDNAGNLVSSNDHFTTGFIDGTNNKQFTIAAPKLGGGLLEWFRLVKYDSDKNFLERDIISYTQNAKTVKVINLADNVAYFKVSFDGLYDESFKIERGNLPSDWSPAPEDTATQISNLSSQIQQTADGMTLLATKTELNSAKSDLQSGISTATSKADNAQSTANSNAQTISTHTTQISALNTGLQAKVSQSDFDSLSGRVTTTESNLTATANQLSSQISSVNERIPSGIGAVNLIKQSTAQKGLRLGMDAEPYVYQNHILSDWIKIEPNTMYTLTTYEDVTAANMYYSLAWYSTNSADYSGWISRPTGAASAADLKGGKQYTSPANAAYAKVSYPIDYPKVKLERGNIATDYSPNPEDYDAALTQAKSEIKQTTDTITASVSSVETKANTAQSTANTAVSKADAAQAGVNTLDSTTVKTASLNLDNNGFVTKVGKTIDGNKFATMIAQDANSVKIIADEMNVTADMIVDGAVTAEKLNVNNLSAVNSNLGKIEGGSLLLQENKTASSSVDNWGTFNRPAHKQGLYMDNHGLASSGAIQRKNGSETTPTDMPLAVLQAGELRFLVVDYNDNLENVLHYGLSDPDYGVIKFEIDSELKRRLTMTSSGYLNFEATNYTSWQSTGVSGCEYMIQGRLVLVNYDVTFNSAGTHTIGGIPQEFTKKSLMMTAKAWTITPRDKNIQLNSDGSLHILDAEANVNYRGTLVFSY
Physico‐chemical
properties
protein length:1334 AA
molecular weight: 144115,42390 Da
isoelectric point:5,05511
aromaticity:0,08396
hydropathy:-0,39093

Domains

Domains [InterPro]
DC_0855
STR
3–163
DC_0855 Coil DC_0855
G3DSA:1.20.5.340
STR
155–272
G3DSA:1.20.5.340 G3DSA:1.20.5.340
DC_1746
STR
160–533
DC_1746 DC_0855
QBX24955.1
1 1334
Architecture
STR
STR 3-1250 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Streptococcus phage Javan220
[NCBI] 		2548052 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Streptococcus equinus
[NCBI] 		1335 cellular organisms > Bacteria > Bacillati > Bacillota > Bacilli > Lactobacillales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QBX24955.1 [NCBI]
Genbank nucleotide accession
MK448877.1 [NCBI]
CDS location
range 34855 -> 38859
strand +
CDS
GTGCCTGATGTGCCGAGCGGGAATAGAAACTTAATTATCCGCTCGCAAATCCAAAATGGTTACATTGATAATGCAGGCAATCTAGTAAGTTCTAACGACCATTTTACAACTGGTTTTATTGACGGAACGAATAACAAGCAGTTTACAATCGCAGCGCCAAAATTAGGCGGCGGTCTATTAGAGTGGTTTAGATTGGTTAAATATGACTCTGATAAGAATTTTTTGGAGCGTGATATTATCTCGTACACTCAAAATGCTAAAACTGTTAAAGTCATCAATTTAGCTGACAATGTCGCTTATTTTAAAGTTAGTTTTGACGGTGTGTATGACGAATCATTTAAAATCGAGCGTGGAAACGTTGCGACACCTTACTCGCAAGCACCAGAAGATTTAGGCTGGTCGACAGCCACACTAGTGCCGACACAGCAACAGCGCTATCTTTGGAAGTTCGAGTACGTTTACTACTCAGACGGCTCGGTCGAAATCACAGACCCAGTCAACCTATCAATCGCAGGGGCTGACGCAAACACGACTGGCGTAACAGATGCAATTAACCAGACAAATCAAACCGTAGCTGGTTTGCAATCAAGCGTCTCACAAGCTCAAAGCGACTTAGCCGCAGTGTCTAGCAATCTTACGCAAGCGCGTCAAAACTTGGAAAGTTCGATTGCGTCGGTAAACACTAAAGCACAAGCAGTTGAAACCACATTAGCACAAGTGCAGTCTACGGCAAACAGCAATAGTCAGAAAACAGCCACACTGGAAAATGATTTGGACGGGTTGAGCGCGAAGTTTAGTAGTTTGAAAGTCGGCGCAGTTAACTTACTTAAAAAAACGAAGACATTCAACTGGTCAAGTTTTTATGGTAGTTCAAAACTTACAGATGAAACCTATCAAGGCTGCGCTGTTAGGTATTTAAAATCAAGCACCGCAACAACTGGTTATCAAGAGGTAGTCCAATTTTCAAATTGTGTTTATCCTACATTAGGTGGCGACTATGTTGCTAGTTTCTGGGCAAAAGGGTCAGGTACTTTTTGTGCATTCTTCTATGGTGGTAATGGTTATTTACAAGTAGCAGCGGCAGAGTCAAGTCAAGGCTCTACAATCACATCATCTGATGGACGAATGGAATTTACTTTGTCCGAAGATTGGCAACGCTATTGGATTAAATACAAACTAAAAACATCACCAGCAAGTGCAACAACTGTTGCTAAACATTTTCTACTTCGCCATAACGCAAATGGTAAAGAAGAAGAAATCTGGGTAGCTGGTTGTCAATTAGAGCAAGGCAACATCGCGACAGATTACAGTCCGAACGAGGCCGACCTTGAATTAAAAGTAGCTGATTACAAACAGACAGCAGACCAAAACTATGCTAGCTTGCAAAGCACTGTCCAAGCCTTAGACGGCACGGTCACAGCAAACAAAGCTACTGCAGACCAAACTGCAGCAGGCTTCAAAACACGTATTGAATCGTTGGAAACATATCAAGCTGGTGAAACTACACGAGCTAACCAGTATTTTGAATCAGCTAAAACTGAGACAGCTAGACAGCTCGCTGCCGAACGCACTGCAATTGCTAACGACTACGTGGCAAAATCAACATATACGTCTGACGTCACTGGTATTCGCAGCGATTTAACAGCAACGACCACGACAGCCAACACGACCAAGACTAACCTTGCCAATTACCAAGCTAGCAACGACCAAGCGGTCGCGAGCTTACAAAGCAACTTGCAGACTACGAACGGAAATGTAAGCAGTTTGCAGACGCAAATCAGCGCAATCCCTGGACAAATCACGAGTGCAGTTAGTGCTGTCGAAGGCAAGATTCCAACGTCTTTGGGTGGACGCAATTTAATTATTAAATCGCAAATTCAAAATGGTTACATTGATAATGCAGGCAATCTAGTAAGTTCTAACGACCATTTTACAACTGGTTTTATTGACGGAACGAATAACAAGCAGTTTACAATCGCAGCGCCAAAATTAGGCGGCGGTCTATTAGAGTGGTTTAGATTGGTTAAATATGACTCTGATAAGAATTTTTTGGAGCGTGATATTATCTCGTACACTCAAAATGCTAAAACTGTTAAAGTCATCAATTTAGCTGACAATGTCGCTTATTTTAAAGTTAGCTTTGATGGGTTATATGACGAATCATTTAAAATTGAACGTGGCAATCTACCAAGTGATTGGTCTCCAGCTCCAGAAGACACAGCCACACAAATCAGCAATCTGTCTAGTCAGATTCAACAAACAGCAGACGGCATGACGTTGCTTGCTACTAAAACAGAGCTAAACAGTGCTAAATCTGATTTGCAAAGTGGTATTAGCACAGCGACAAGCAAAGCTGATAACGCTCAATCCACAGCGAATAGTAACGCGCAAACAATCAGCACACACACGACTCAAATCAGCGCATTGAATACAGGCTTGCAAGCTAAGGTCTCGCAGTCTGATTTTGATTCGCTCTCTGGTCGTGTGACAACCACTGAAAGTAATTTGACAGCGACAGCTAACCAATTGAGCAGCCAAATTAGTAGCGTGAATGAGCGAATTCCGAGTGGAATTGGTGCGGTAAACTTAATCAAACAATCCACTGCTCAAAAAGGACTGCGTCTTGGAATGGACGCTGAGCCGTATGTGTACCAAAATCATATTTTAAGTGATTGGATTAAAATCGAACCAAATACAATGTACACGTTGACTACTTACGAAGACGTGACGGCAGCTAATATGTATTATTCGCTGGCTTGGTACAGTACGAATAGCGCTGATTACAGTGGCTGGATAAGCCGTCCGACTGGTGCAGCATCAGCTGCTGATTTAAAAGGCGGAAAGCAATATACAAGTCCAGCCAACGCTGCTTATGCAAAAGTGTCTTATCCGATTGATTATCCAAAAGTTAAATTAGAACGCGGGAACATCGCAACTGATTACAGCCCGAACCCTGAAGATTACGACGCAGCTCTCACACAAGCCAAGTCCGAAATCAAACAAACGACTGACACAATCACTGCAAGCGTGTCAAGCGTTGAAACCAAAGCTAACACAGCACAATCAACAGCTAACACAGCCGTTTCAAAAGCTGATGCAGCTCAAGCGGGTGTTAACACATTGGACAGCACGACGGTTAAAACGGCTAGCTTAAACCTTGACAACAACGGATTCGTGACAAAAGTCGGCAAGACCATTGACGGCAATAAATTTGCAACAATGATTGCGCAAGACGCTAACAGCGTCAAAATCATCGCAGACGAGATGAATGTAACTGCCGACATGATTGTCGACGGCGCAGTGACAGCTGAAAAGCTAAACGTAAACAATCTGTCTGCAGTTAATTCAAACCTCGGTAAAATCGAAGGTGGTTCGCTCTTGCTGCAAGAGAACAAGACCGCAAGTAGCTCCGTTGATAACTGGGGCACATTCAACCGCCCAGCGCATAAGCAAGGTTTGTACATGGACAACCATGGATTGGCTTCATCTGGTGCGATTCAGCGAAAAAACGGTAGTGAAACAACACCGACAGATATGCCCCTAGCTGTATTGCAAGCTGGAGAACTTCGTTTTCTTGTTGTCGATTATAACGATAATCTCGAGAACGTCCTACACTATGGTTTGTCTGACCCAGACTACGGTGTTATCAAATTCGAAATCGACAGTGAACTAAAACGACGTCTGACAATGACGTCGTCAGGTTACCTTAACTTCGAGGCTACTAACTATACAAGCTGGCAATCAACGGGCGTAAGTGGATGTGAGTATATGATTCAAGGACGTCTGGTACTCGTAAATTATGACGTGACATTTAATAGCGCTGGAACGCATACGATTGGCGGTATTCCGCAAGAATTTACCAAAAAATCGCTCATGATGACAGCAAAAGCGTGGACGATTACGCCACGAGACAAGAATATCCAGCTTAATTCAGACGGCTCACTGCATATTCTGGACGCGGAAGCTAACGTCAACTATCGTGGCACGCTAGTATTTAGTTATTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
bc84883a266081bf5457c1fda5b3e66612e5c7156d425a0b694bb453b3c0a219
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,5876
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Prophages and satellite prophages are widespread among Streptococcus species and may play a role in pneumococcal pathogenesis Rezaei Javan,R., Ramos-Sevillano,E., Akter,A., Brown,J. and Brueggemann,A.B. 2018-12-20 — GenBank