Protein

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Genbank accession
AHB79438.1 [GenBank]
Protein name
tail spike protein
RBP type
TSP
Evidence UniProt/TrEMBL
Probability 1,00
TF
Evidence Phold
Probability 1,00
Protein sequence
MNEMFSQGGKGSTGILTNKQAIARRFGVKQSEVVYFSVGVDLGGYKVIYDKETQRSYSLPAGIAPGTTAVSLGANAVLVHSAGSVDLGELAVSREEYVTLPGSFDTGATLNAKNELLII
Physico‐chemical
properties
protein length:119 AA
molecular weight: 12471,96650 Da
isoelectric point:5,74627
aromaticity:0,07563
hydropathy:0,06471

Domains

Domains [InterPro]
G3DSA:3.30.2020.50
ATT
1–95
G3DSA:3.30.2020.50
DC_1953
STR
1–118
DC_1953
AHB79438.1
1 119
Architecture
ATT
STR
ATT 1-95 | STR 96-118 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
AHB79438.1
1 119
Domain Start End Length (AA) Confidence
N-terminal 1 83 83 0,3733
Central domain 84 108 26 0,5083
C-terminal 109 119 10 0,9366
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-83
Central
84-108
C-terminal
109-119

Taxonomy

  Name Taxonomy ID Lineage
Phage Shigella phage pSb-1
[NCBI] 		1414738 Uroviricota > Caudoviricetes > Schitoviridae > Gamaleyavirus > Gamaleyavirus Sb1
Host Shigella boydii
[NCBI] 		621 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)

No CDS data available.

Genome Context

Genome Context

Tertiary structure

PDB ID
2ef78d769dc8a141105b5d69e6ab34b8a355e93c6df0c798388985fc73a46771
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,3400
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50