Protein

Genbank accession
CAB4143047.1 [GenBank]
Protein name
Collagen triple helix repeat
RBP type
TF
Evidence RBPdetect2
Probability 0,95
TF
Evidence Phold
Probability 1,00
Protein sequence
MSFSFLSGAVKTTNTNFSVDGYILPSEVERALGNPSANGQLLASNTDGVRYWTSNISVDTLSVETLIANGEIGNAGQALVSDGQKVYWSDNTGYTGSQGLQGRQGATGFVGSQGLQGAQGVVGAQGVQGAQGAQGVQGVVGAQGAQGVQGATGFVGSQGLQGAQGAQGAQGAVGAQGVQGAVGAQGAQGAQGAQGETGFVGSQGLQGVQGAQGAQGVQGAVGAQGVIGAQGAIGFTGSQGLQGVQGAVGAQGAQGVQGAAGTSVTIIDSVTNVNDTFPGGGPNDPDGYLSYYYPSAVAGNGVIDQATGDLWVYSGTTWNDAGRIVGPQGPIGFTGSQGLQGVQGVQGAQGVQGPIGFTGSQGLQGVQGIAGAQGPQGTQGVQGAVGAQGVQGAVGAQGVQGVDGAQGPSGFTGSRGAQGVQGAQGVQGAVGAQGAQGVQGPQGVQGEVGFVGSQGLQGAQGAIGPQGFQGVIGAQGAQGTQGVQGAVGFTGSQGLQGTQGFQGVQGATGFTGSQGLQGTQGVQGAVGAQGVQGAVGAQGVQGVVGAQGVQGATGFTGSQGLQGVQGAQGVQGPIGFTGSQGLQGVQGAQGVQGAQGAQGVQGATGFVGSQGLQGVQGATGFTGSQGLQGVQGAQGVQGAVGAQGAQGATGFVGSQGLQGAQGVQGPIGFTGSQGLQGVQGAVGAQGVQGAQGVQGAQGAQGVIGFTGSQGAQGRDGNFGGASFYYRWLNDTDSVAIANGYIELTNTNPTLATIVGISYLDRNNKDLTSFIQTIDDSTSAIKGSIKITEEANTTNFVIYNITGNHTVTPSDGHFDIPVSFVTGLFVPPANNANIVASFLVSGDKGDQGPIGFTGSQGSQGRQGAQGAQGVQGAQGFQGVQGAVGAQGVQGATGFTGSQGLQGAQGLQGVQGAIGFTGSQGLQGAQGVIGAQGAQGAQGVQGAIGFTGSQGLQGVQGVQGAQGATGFTGSQGLQGVQGATGFVGSQGLQGAQGFQGVQGATGFTGSQGLQGAQGVQGVVGAQGAQGVQGATGFVGSQGLQGRQGDVGFVGSQGLQGRQGFQGVQGATGFTGSQGSQGVQGATGAQGLIGFTGSQGLQGAQGVQGVVGAQGAQGVQGATGFTGSQGLQGTQGVQGVVGAQGPSGFTGSAGAQGVQGAVGAQGPTGFVGSQGLQGAQGAVGAQGTQGVQGAAGAQGVQGATGFVGSQGLQGVQGAAGAQGVQGAPGVGTQGGTGPQGPQGVQGAIGPQGPQGVQGVVGAQGVQGAPGPIAGSTTQVIFNDGGFANGSPNFTFNKATNLLTVAGPATITGNLTVTGTQTVVNSNIIAIGDAILVLNSDIPFNVAPSENAGIEVNRGSSANVQFMWDETNDRWSTNTQPFSAGSTTITGTATITSTALVGSDAATNYDFRLQRLNSGIRAVQHDFAAAANSPWILHGENLLWTGERAGTVESTQAFKPYYEAFAPAVGYKEFGFVNATSGSFTGTNLIPNLVLNADGNVGIGTTAPARKLTVRGDSVGTLTVAAFYNADVTNNNGSVFSFRTDTSGTGAQTFWEYAGVSGVVTEHNNATRAGSLAFFTANSSAAATRLTITSGGNVGIGTTTPQQPFVVSNAGAEGIEILPTGVLQSFNRGTSAYQPINIDASIHVFRTGTTERMRIDAAGDVGIGATPAFTSGSGLEVQRAGVATVRIENSNFNASEMRQTGAAFELMSLGSQPLILGTNNTERARIGTDGNLLVGGTVSYTRLTVSNGNGNRSGITISDASTASLMFFAGASQGAVISTDAIHQALIFRRGSTAGTENGTETMRIDGSGNVGIGTASPGYRLEVNGSFAATTKSFVINHPTKEGMKLRYGSLEGPENGVYVRGRLSDSDTIVLPDYWTGLVDEDSITVNLTPIGKHQKLSVSNVAIDTITVKNDNILNSVIDCYYIVYAERKDVEKLVVEY
Physico‐chemical
properties
protein length:1937 AA
molecular weight: 189586,61210 Da
isoelectric point:4,71612
aromaticity:0,06247
hydropathy:-0,08523

Domains

Domains [InterPro]
IPR008160
201–259
IPR008160 IPR008160 IPR008160 IPR050938
IPR008160
841–896
IPR008160 IPR008160
CAB4143047.1
1 1937
Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage uncultured Caudovirales phage
[NCBI] 		2100421 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
CAB4143047.1 [NCBI]
Genbank nucleotide accession
LR796423 [NCBI]
CDS location
range 52872 -> 58685
strand -
CDS
ATGTCATTTTCGTTTTTATCTGGCGCAGTAAAAACTACCAATACCAACTTCTCTGTTGACGGCTATATTCTACCGTCTGAAGTTGAAAGAGCTCTAGGTAATCCTTCAGCTAACGGTCAGCTGCTTGCTTCTAATACAGATGGCGTCAGATACTGGACCTCTAACATCAGCGTCGATACATTAAGTGTTGAGACTCTAATTGCTAACGGTGAGATTGGTAATGCCGGTCAAGCGTTAGTATCTGATGGTCAAAAAGTATATTGGTCAGATAATACTGGTTATACAGGCTCACAAGGTCTTCAGGGGCGTCAAGGTGCTACCGGCTTTGTAGGCTCCCAGGGTCTACAAGGCGCTCAAGGTGTAGTTGGTGCGCAAGGCGTTCAAGGTGCACAAGGTGCGCAGGGCGTACAGGGCGTAGTCGGCGCACAGGGTGCTCAAGGCGTTCAAGGTGCTACTGGCTTTGTTGGATCGCAAGGACTACAGGGTGCGCAAGGCGCGCAAGGTGCCCAGGGTGCTGTTGGCGCCCAAGGCGTTCAGGGTGCCGTTGGTGCACAAGGTGCACAGGGCGCTCAGGGTGCACAAGGTGAAACAGGATTTGTTGGCTCGCAGGGTCTGCAAGGCGTACAAGGTGCACAAGGGGCCCAGGGTGTTCAAGGGGCAGTAGGCGCTCAAGGCGTAATCGGCGCGCAAGGCGCGATTGGTTTCACGGGCTCACAAGGTCTGCAGGGTGTTCAAGGCGCAGTTGGTGCCCAGGGTGCTCAAGGTGTTCAAGGTGCCGCTGGTACATCCGTAACTATTATTGATTCAGTAACTAACGTTAATGATACATTCCCTGGCGGCGGTCCTAACGATCCAGACGGCTATCTAAGCTACTATTATCCAAGCGCTGTAGCTGGTAACGGTGTTATCGACCAGGCTACTGGTGACTTATGGGTGTATTCAGGTACAACCTGGAATGATGCTGGTAGAATTGTCGGCCCTCAAGGTCCTATCGGCTTCACCGGATCTCAAGGTCTCCAAGGCGTTCAAGGTGTACAAGGTGCGCAGGGTGTTCAAGGTCCGATCGGATTTACTGGATCTCAAGGTCTACAAGGGGTTCAGGGTATTGCTGGAGCTCAAGGCCCGCAAGGTACCCAAGGCGTACAGGGTGCGGTTGGTGCACAAGGTGTACAAGGTGCTGTTGGTGCCCAGGGTGTTCAAGGCGTTGATGGTGCCCAAGGTCCATCCGGCTTTACAGGCTCTCGTGGCGCACAAGGAGTACAGGGAGCGCAAGGTGTTCAAGGTGCGGTTGGCGCTCAGGGTGCCCAAGGCGTTCAAGGCCCGCAGGGCGTACAAGGTGAGGTAGGTTTTGTAGGCTCGCAGGGCCTTCAAGGAGCTCAAGGCGCTATTGGACCACAAGGCTTCCAGGGTGTTATTGGTGCCCAGGGTGCGCAAGGTACGCAGGGTGTTCAGGGTGCTGTTGGTTTCACTGGCTCACAGGGTCTTCAAGGAACTCAAGGCTTCCAGGGGGTTCAGGGTGCGACCGGCTTTACTGGATCACAAGGTCTACAAGGCACGCAAGGCGTACAGGGGGCAGTAGGTGCTCAAGGCGTCCAAGGCGCGGTCGGTGCGCAGGGCGTTCAAGGCGTCGTTGGTGCTCAGGGCGTTCAGGGCGCGACCGGCTTTACTGGTTCGCAAGGCCTACAGGGTGTACAGGGTGCTCAAGGTGTACAGGGTCCAATTGGATTTACTGGCTCACAAGGTTTGCAGGGTGTACAGGGCGCGCAGGGTGTTCAAGGTGCGCAAGGCGCGCAAGGCGTTCAAGGTGCAACCGGTTTTGTAGGCTCGCAAGGTCTGCAAGGTGTACAAGGTGCGACTGGCTTTACCGGCTCACAAGGCCTGCAGGGCGTACAGGGCGCTCAAGGCGTACAGGGTGCTGTTGGCGCTCAAGGTGCACAGGGTGCAACCGGGTTTGTAGGCTCACAAGGCCTTCAAGGGGCTCAGGGTGTTCAAGGTCCTATCGGCTTTACTGGCTCTCAAGGCTTACAAGGCGTTCAAGGCGCTGTCGGTGCTCAAGGCGTTCAGGGGGCGCAGGGTGTTCAGGGTGCTCAAGGTGCGCAAGGCGTAATCGGTTTCACTGGCTCACAGGGTGCTCAAGGTCGTGATGGTAACTTCGGTGGTGCATCATTCTACTACAGATGGTTAAACGATACAGATAGTGTCGCGATAGCTAATGGTTACATTGAACTTACTAATACGAACCCAACCCTTGCAACTATAGTTGGTATTTCATATCTAGATAGAAACAATAAAGACCTTACATCGTTCATTCAGACAATCGATGACTCTACATCAGCCATCAAAGGCTCTATCAAGATTACTGAAGAAGCAAACACTACCAACTTCGTAATCTATAATATTACAGGTAACCATACAGTAACACCTAGTGACGGGCATTTCGATATCCCCGTATCGTTTGTTACAGGTTTATTTGTACCGCCTGCTAATAACGCAAATATCGTCGCATCGTTCCTAGTTTCTGGCGATAAGGGTGACCAGGGTCCAATCGGCTTTACCGGTTCGCAGGGTAGCCAAGGCCGTCAAGGTGCACAAGGCGCACAAGGCGTACAGGGCGCTCAAGGCTTCCAGGGTGTTCAGGGTGCTGTTGGTGCACAGGGGGTACAGGGCGCTACAGGCTTTACCGGATCGCAAGGCTTGCAGGGCGCACAAGGCTTACAAGGCGTTCAAGGCGCTATTGGATTTACTGGCTCGCAAGGTCTGCAAGGCGCTCAAGGCGTAATTGGTGCACAAGGAGCGCAGGGCGCTCAAGGCGTACAGGGTGCTATTGGATTTACTGGCTCGCAAGGTCTGCAAGGCGTTCAAGGCGTTCAAGGTGCTCAGGGGGCCACAGGCTTTACAGGGTCACAAGGTCTGCAAGGCGTTCAGGGTGCTACAGGTTTTGTCGGCTCCCAAGGTCTTCAAGGAGCTCAAGGCTTCCAAGGCGTACAGGGCGCAACTGGATTTACCGGATCACAGGGACTGCAGGGTGCTCAAGGCGTTCAGGGTGTTGTCGGCGCTCAAGGTGCACAGGGCGTCCAAGGCGCTACCGGCTTCGTTGGATCGCAAGGTCTGCAGGGTCGCCAAGGTGATGTAGGCTTTGTAGGTTCTCAAGGTCTTCAAGGACGTCAAGGCTTCCAAGGCGTTCAAGGCGCTACTGGCTTTACAGGTTCGCAGGGATCCCAGGGCGTACAAGGCGCGACAGGCGCGCAAGGTCTAATCGGCTTTACCGGTTCGCAAGGACTTCAGGGCGCGCAGGGCGTACAAGGTGTTGTAGGTGCCCAGGGTGCTCAAGGTGTACAGGGCGCTACTGGATTTACTGGCTCACAAGGTCTTCAAGGTACACAAGGCGTACAGGGTGTTGTAGGTGCGCAAGGTCCATCTGGATTCACCGGTTCAGCTGGCGCTCAAGGCGTTCAGGGTGCGGTTGGTGCTCAAGGACCTACTGGCTTCGTAGGCTCACAGGGTCTGCAAGGCGCACAGGGTGCTGTAGGCGCTCAGGGTACTCAGGGTGTTCAAGGCGCTGCTGGCGCACAAGGCGTTCAGGGTGCAACAGGTTTCGTAGGATCGCAAGGTCTACAGGGTGTTCAAGGCGCTGCTGGTGCTCAAGGCGTCCAGGGTGCACCTGGCGTTGGTACGCAGGGCGGCACCGGTCCACAAGGACCTCAGGGCGTTCAAGGAGCAATTGGACCTCAGGGCCCACAAGGTGTTCAGGGTGTAGTTGGTGCGCAGGGTGTTCAGGGTGCACCTGGTCCTATTGCCGGTTCCACAACGCAAGTCATCTTTAACGACGGTGGCTTTGCAAACGGTTCTCCTAACTTTACATTCAACAAAGCAACTAACCTTCTAACAGTTGCAGGCCCTGCTACTATTACAGGTAACCTAACAGTTACTGGTACGCAGACAGTTGTTAACTCGAATATCATCGCAATCGGTGACGCTATTCTGGTACTGAATAGTGATATTCCATTCAACGTTGCGCCATCTGAGAATGCTGGTATTGAAGTTAACCGTGGTTCGTCCGCTAACGTACAGTTTATGTGGGATGAAACAAACGATCGCTGGTCAACAAATACTCAGCCGTTTAGTGCCGGGAGCACAACTATCACCGGTACTGCTACTATTACAAGCACTGCTTTAGTTGGTAGTGATGCCGCAACAAATTATGACTTTAGACTTCAAAGATTAAACAGCGGTATTAGAGCGGTACAGCATGACTTTGCTGCAGCTGCGAACAGCCCTTGGATTCTTCATGGTGAGAACCTGCTATGGACGGGTGAGAGAGCTGGTACTGTCGAATCTACACAAGCGTTTAAGCCTTACTATGAAGCTTTCGCGCCTGCAGTAGGTTATAAGGAATTTGGTTTTGTTAATGCGACCTCAGGTTCGTTCACAGGTACCAATCTAATTCCTAATCTTGTACTTAATGCTGATGGTAATGTCGGTATCGGTACAACTGCCCCGGCTAGAAAGCTAACTGTACGCGGCGATAGTGTAGGAACACTTACAGTTGCTGCATTCTATAATGCTGATGTTACTAATAATAACGGCTCAGTATTCAGCTTCAGAACAGATACATCGGGAACCGGTGCTCAGACTTTCTGGGAATATGCTGGTGTCTCAGGTGTTGTTACAGAGCACAATAACGCAACAAGAGCAGGCTCACTAGCCTTCTTTACAGCTAACTCATCTGCTGCAGCTACAAGATTAACGATTACAAGCGGCGGTAATGTTGGAATTGGAACGACCACTCCCCAACAGCCTTTTGTTGTAAGTAATGCTGGCGCTGAAGGTATTGAAATTTTACCTACTGGTGTATTGCAATCATTTAACCGCGGAACATCGGCGTACCAACCTATTAATATAGATGCGAGCATACACGTATTTCGCACAGGTACAACAGAACGCATGCGCATTGATGCAGCAGGCGATGTTGGAATTGGGGCAACTCCCGCATTTACATCTGGTAGCGGCCTCGAAGTACAGCGCGCTGGAGTAGCAACAGTACGTATTGAAAATAGCAACTTTAATGCTTCAGAAATGCGTCAAACCGGTGCTGCTTTTGAACTAATGTCTCTGGGCTCGCAGCCACTTATACTTGGTACGAATAACACCGAACGCGCCCGTATCGGCACTGATGGCAACCTATTGGTGGGTGGAACAGTCTCATACACCAGACTTACAGTTAGTAACGGGAATGGTAACAGATCCGGTATAACAATCAGCGATGCTAGCACCGCTTCATTAATGTTCTTCGCCGGCGCTTCTCAGGGAGCCGTTATATCTACTGATGCTATCCACCAAGCGCTAATTTTCAGGCGCGGATCTACAGCCGGTACGGAAAACGGCACAGAAACCATGCGTATCGACGGCAGCGGCAACGTCGGTATTGGGACTGCTTCACCTGGTTACAGACTAGAAGTTAACGGCTCGTTTGCTGCAACAACCAAGTCGTTCGTTATCAATCACCCAACTAAAGAAGGCATGAAGCTTCGCTACGGATCGCTCGAAGGTCCTGAGAATGGTGTATATGTTCGCGGTAGACTAAGTGATTCGGATACAATCGTTCTACCTGATTACTGGACAGGACTAGTTGACGAAGATTCTATTACAGTTAACCTAACACCAATTGGTAAGCATCAGAAGCTTTCTGTAAGCAATGTAGCCATTGATACAATTACTGTTAAGAATGATAATATACTCAATAGCGTAATTGATTGCTACTACATTGTGTACGCTGAGCGTAAGGATGTCGAGAAGCTTGTAGTGGAGTATTAA

Gene Ontology

No Gene Ontology terms available.

Enzymatic activity

No enzymatic activity data available.

Tertiary structure

PDB ID
70fc3ac39f2d8bba82fbbc37ad439bcd366fd0e2dff8e906a3312c1746cbdb36
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,4721
Evidence 0,4721
Download PDB

Literature

No literature entries available.